Gemmatirosa kalamazoonensis: J421_2583
Help
Entry
J421_2583 CDS
T03025
Name
(GenBank) ABC transporter transmembrane region
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J421_2583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_2583
Enzymes [BR:
gba01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
J421_2583
Transporters [BR:
gba02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J421_2583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
RsgA_GTPase
AAA_21
ABC_ATPase
AAA_30
nSTAND1
AAA_25
Rad17
AAA_PrkA
AAA_23
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AHG90120
UniProt:
W0RIE9
LinkDB
All DBs
Position
3007662..3009476
Genome browser
AA seq
604 aa
AA seq
DB search
MYGRLLPFLRPHVSRLVGAIGSSLLAAVFDAFTLALLIPFLGALFQEPRYGVTGTDLVSR
VLRATVSTLLVPGDQMASLQRVVLVIIAAVLVKNVFVWLAGHLGAQLQEYVTRDLRDAVY
AHLARLPLGYFLSTKTGQILARVLTDTAQAKQLVVEVVTRSLQSAAQVLVTVALMIAISW
RLSLIIPVAAVALVGALNPLLRKLRKRHRSQSAQYGEITSVAQETVNGVRLVKSFGGERY
EIERFRSASHDFAKGGVRAARLATMAQPVTEVVSTGIAVAVLWYGARLVIVDHTLGASAL
ILFLVYVMNMLRPLKQLSQVPTTAQQALAAAERLFDVLDRPTEQALDRGTIAPARFERSL
TFDRVTFAYGGDPVLRDVSLTARRGQVVALVGPSGAGKSTLVDLIPRFHEPTAGRVLLDG
VDTREFRLDALRALIGIVSQDTVLFNDTVRNNIAYGAGDRFTDAQVEAAARAANAHGFVA
ELPHGYDTVLGERGARLSGGQRQRIAIARALLVDPPILVLDEATSALDTESERLVQEAID
RLLANRTVFVIAHRLSTVVHADQILVLDRGAIVERGTHAELLAIGGMYARLHALQFRAAG
EEAA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtacggccggctgctgccgttcctccgcccccacgtctctcggctcgtcggcgcgatc
ggcagctcgctgctcgccgcggtgttcgacgcgttcacgctcgcgctgctcatcccgttc
ctcggcgcgctgttccaggagccgcgctacggcgtgaccggcaccgacctcgtgagccgc
gtcctccgcgcgacggtcagcacgctgctcgtgccgggcgaccagatggcgtcgctgcag
cgcgtcgtgctcgtgatcatcgccgcggtgctcgtgaagaacgtgttcgtgtggctcgcc
ggccacctcggcgcgcagctgcaggagtacgtcacgcgcgacctccgcgacgccgtctac
gcgcatctcgcccggctgccgctcggctacttcctctcgacgaagacggggcagatcctc
gcccgcgtgctgaccgacacggcgcaggcgaagcagctcgtcgtcgaggtggtcacgcgg
tcgctgcagagcgcggcgcaggtgctcgtcaccgtcgcgctcatgatcgcgatctcgtgg
cggctgtcgctcatcatccccgtcgccgcggtggcgctcgtcggcgcgctgaacccgctg
ctgcgcaagctgcgcaagcggcaccgcagccagagcgcgcagtacggtgagatcacgagc
gtcgcgcaggagaccgtgaacggcgtgcggctcgtgaagtcgttcggcggcgagcgctac
gagatcgagcgcttccgttcggccagtcacgacttcgcgaagggcggcgtgcgcgcggcg
cgtctcgcgacgatggcccagccggtgacggaggtggtgtcgacggggatcgcggtcgcg
gtgctctggtacggcgcgcggctcgtcatcgtcgaccacacgctcggcgcctcggcgctg
atcctgttcctcgtctacgtcatgaacatgctgcggccgctgaagcagctctcgcaggtg
ccgaccacggcgcagcaggcgctcgcggcggccgagcggctgttcgacgtgctcgaccgg
ccgacggagcaggctctcgaccgcggcacgatcgccccggcacgcttcgagcgttcgttg
acgttcgaccgcgtgacgttcgcgtacgggggcgaccccgtgctgcgcgacgtctcgctc
acggcgcgccgcggccaggtggtcgcgctcgtcggcccgagcggggcggggaagagcacg
ctcgtcgacctcatcccccgcttccacgagccgaccgccggccgcgtgctgctcgacggc
gtggacacgcgcgagttccgcctcgatgccctgcgcgcgctgatcgggatcgtcagtcag
gacacggtgctcttcaacgacacggtgcggaacaacatcgcctacggcgcgggcgaccgc
ttcaccgacgcgcaggtggaggccgccgcccgcgccgcgaacgcgcacggcttcgtggcc
gagctgccgcacggctacgacaccgtgctcggcgagcgcggcgcgcgactctccggcggc
cagcgccagcgcatcgcgatcgcgcgcgcgctgctcgtcgacccgccgatcctcgtcctc
gacgaggccacctccgcgctcgacacggagagcgagcgcctcgtgcaggaggcgatcgac
cggctgctcgcgaaccgcaccgtgttcgtgatcgcgcaccgactcagcacggtcgtgcac
gccgaccagatcctcgtcctcgaccgcggggcgatcgtcgagcgcggcacgcacgcggag
ctgctcgccatcggcggcatgtacgcgcggctgcacgcgctgcagttcagagccgcgggg
gaggaggcggcgtag
DBGET
integrated database retrieval system
