Gemmatirosa kalamazoonensis: J421_2641
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Entry
J421_2641 CDS
T03025
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00540
Lipopolysaccharide biosynthesis
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
J421_2641
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gba01005
]
J421_2641
Enzymes [BR:
gba01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
J421_2641
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
J421_2641
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
J421_2641
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
J421_2641
Lipopolysaccharide biosynthesis proteins [BR:
gba01005
]
Lipid A
J421_2641
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_1_2
Glyco_trans_4_4
Glycos_transf_1
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AHG90178
UniProt:
W0RL78
LinkDB
All DBs
Position
complement(3073520..3074866)
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AA seq
448 aa
AA seq
DB search
MNPFIRPVYAAAGQLARVSAALVPAGESKVRRALRARRGIRKRFAAWGANGRDTSRPLLW
MHAPSVGEGLQARPVLELARRLRPDLQLAYTFYSPSAERFAKTLDVDFADYLPFDTGGDA
VAALDALRPSALVFAKLDVWPLLSATAARRRVKVGLVSATLSEGSSRRGPLARLALHSAY
EVLDAVGAISDEDAARLTALGVRADRVAVTGDTRFDQAWRRAEAVDRSAPFLAPLLGDRF
TLVAGSTWPADETVLLEAWVAVRRQNPKARLVIAPHEPTDAHLSAVEKWAAAHRAPLARL
GDVESGAARDADVVLVDRVGVLAELYAAGSAAFVGGGFHEAGLHSVLEPAACGLPVCFGP
RHTESRDAGLLLAAGGAATAATSRALAEQIRRWMTSEALRAHAGTAARDVVRAGLGADTR
TWALIEGLLGRAHAAGGATDSAGAVAEG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccgttcatccggccggtctacgcggccgcggggcagctcgcgcgcgtctccgcc
gcgctcgtccccgcgggggagagcaaggtgcgccgcgcgctgcgggcgcggcgcggcatc
cgcaagcggttcgcggcgtggggcgcgaacggtcgcgacacgagccggccgctgctctgg
atgcacgcgccgagcgtgggcgagggactgcaggcgcgtcccgtgctcgagctggcgcgc
cgtctccgacccgatctgcagctcgcgtacacgttctactcgcccagcgccgagcgcttc
gcgaagacgctcgacgtcgacttcgccgactacctgccgttcgacacgggcggcgacgcg
gtggccgcgctcgacgcgctgcgcccgtcggcgctcgtgttcgcgaagctcgacgtgtgg
ccgctgctctccgcgacggccgcgcggcggcgcgtgaaggtgggcctggtgagcgcgacg
ctgagcgagggctcgtcgcgccgcgggccgctggcgcggctcgcgctgcacagcgcctac
gaggtgctcgacgcggtcggggcgatcagcgacgaggatgccgcgcgcctaacggcgttg
ggcgtccgcgccgaccgcgtggccgtcaccggggacacgcgcttcgaccaggcgtggcgg
cgcgccgaagccgtggaccgctcggccccgttcctcgcgccgctgctcggcgaccgcttc
acgctcgtcgccggcagcacgtggccggccgacgagacggtgctgctcgaggcgtgggtc
gcggtgcgacgccagaacccgaaggcgcgtctcgtcatcgcgccgcacgagcccaccgac
gcgcacctctcggccgtcgagaagtgggccgccgcgcaccgcgccccgctcgcgcgcctc
ggcgacgtcgagagcggcgcggcgcgcgatgccgacgtcgtgctcgtggaccgcgtcggc
gtgctggcggagctctacgcggcggggagcgcggcgttcgtcggcggcggcttccacgag
gcggggctgcactcggtgctcgagccggcggcgtgtgggcttcccgtctgcttcgggccg
cgccataccgagagccgcgatgccgggctgctgctggccgcgggcggcgccgccaccgcg
gccacctcgcgcgcgctggccgagcagatccgccgctggatgacgagcgaggcgctgcgc
gcgcacgccggcaccgccgcgcgcgacgtcgtgcgcgcgggactcggcgccgacacgcgc
acgtgggcgctgatcgaggggctgttaggccgcgctcacgcggccggcggcgccacggac
tccgccggcgccgtcgccgagggctga
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