Gemmatirosa kalamazoonensis: J421_2881
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Entry
J421_2881 CDS
T03025
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03030
DNA replication
gba03430
Mismatch repair
gba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J421_2881
03430 Mismatch repair
J421_2881
03440 Homologous recombination
J421_2881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gba03032
]
J421_2881
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_2881
Enzymes [BR:
gba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J421_2881
DNA replication proteins [BR:
gba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J421_2881
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J421_2881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
AAA_5
ResIII
AAA_16
RCF1-5-like_lid
AAA_24
AAA_18
ORC-CDC6-like
Rad17
AAA_14
Mg_chelatase
RNA_helicase
AAA_33
AAA_19
AAA_25
DUF815
AAA_assoc_2
nSTAND3
TsaE
AAA_28
NACHT
ABC_tran
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHG90418
UniProt:
W0RLV0
LinkDB
All DBs
Position
3341728..3343527
Genome browser
AA seq
599 aa
AA seq
DB search
MALALARKYRPKSFSEVAVQSHVSNTLKGAIARGRVAHGYLLCGPRGTGKTTLARVLAMA
LNCEVRGAKGDGEPCGECASCRRIWSGASSLDVVEIDAASNRSVDDARELRERAMYAPTG
EDRYKVYIVDEAHMLTREAWNALLKVLEEPPPRVVFVFATTEPQKIAQTAAPILSRLQRF
DLRRIGPAEIRERLTAVLTAEGVSFEPEALGMIARAADGGLRDALSLTDQVLSLGADARV
TTDRVAEALGLVPEDEYLAILDLVAARRAGDVFAAVARLADAGVDFTLFLAGLGDVLRAL
LATALGGTAPDLSERLRQALDERRERIAPADLLRMLQLLVEAEPRFRRSGQQRLLLETLL
VRFALMDRAVDLESVLRELGGAPTPSGSAAGGARRSVPSTAVETPAPPPRRAAPPPSAQP
APRPQPESRATGSAFGDWAPPEPPPEASAAPARAAGTTVLERPAPPRATSAAPVVDVHTL
AERWEEVVEQARSTRPLVGTALAATLPVAIAASGVVTVELQEANDAHVFALESGRDDVLT
ALRLVVPNASRLVVRAPDSPAPVERLTTESVRAERMASLAKRDPTLGAAISELDLDLLD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgccctcgcgcgaaagtaccgcccgaagtcgttctccgaggtcgcggtccag
tcgcacgtctcgaacacgctgaagggggcgatcgcgcgcggccgcgtggcgcacggctac
ctgctgtgcggcccgcgcggcaccgggaagacgacgctcgcccgcgtgctcgcgatggcg
ctcaactgcgaggtgcgcggcgcgaagggcgacggtgagccgtgcggcgagtgcgcgagc
tgccgccgcatctggagcggcgcgtcgagcctcgacgtcgtggagatcgatgcggcgagc
aatcgcagcgtcgacgacgcgcgcgagctgcgcgagcgcgcgatgtatgcgcccaccggc
gaggaccgctacaaggtctacatcgtcgacgaggcgcacatgctcacgcgcgaggcgtgg
aacgcgctgctcaaggtgctcgaggagccgccgccgcgcgtcgtgttcgtgttcgccacc
accgagccgcagaagatcgcgcagaccgcggcgccgatcctcagccggctacagcgcttc
gacctgcgccgcatcggcccggccgagatccgcgagcgcctcactgccgtgctgacggcc
gaaggcgtgtcgttcgagccggaagcgttaggcatgatcgcccgtgccgccgacggcggc
ctgcgcgacgcgctgtcgctcaccgaccaggtcctctcgctcggcgccgacgcgcgcgtc
acgacggaccgcgtcgccgaggcgttaggcctcgtgcccgaggacgagtacctcgcgatc
ctcgacctcgtcgccgctcggcgcgcgggcgacgtgttcgctgcggtggcgcgcctcgcc
gacgcgggcgtcgacttcacgctcttcctcgccggcctcggcgacgtgctgcgcgcgctg
ctcgccaccgcgctcggcgggacggcgccggacctcagcgagcggctgcgacaggcgctc
gacgagcgccgcgagcgcatcgcgccggccgatctgctgcgcatgctgcagctcctcgtc
gaggcggagccgcgcttccgccgcagcggtcagcagcgcctcctgctcgagacgctgctc
gtccgcttcgcgctcatggaccgcgcggtcgatctcgagtcggtgctgcgcgagctcggt
ggcgcgccgacgccgagtggctcggccgccggcggcgcccggcgctcggttccatccacc
gcggtcgagacgcccgcgccgccgccacgccgtgccgcgccgccgccgagcgcccaaccc
gctccgcggccgcagcccgagtcacgcgccacgggctccgcattcggcgactgggcgccg
cccgagccgccccccgaggcgagcgccgctcccgcacgcgccgccggcacgacggtcctc
gagcgcccggcaccgccgcgcgcgacgagcgcggcaccggtggtcgacgtgcacacgctg
gccgagcgttgggaggaggtcgtggagcaggcgcgcagcacgcgtccgctcgtcggcacc
gcgctcgccgccacgctccccgtcgcgatcgccgcgagcggcgtcgtgacggtggagctg
caggaagcgaacgacgcgcacgtgttcgcgctggagagcggccgcgacgacgtgctcacc
gcgctgcgcctcgtcgtgcccaacgcgtcgcgcctcgtcgtccgcgccccggactcgccg
gcgccggtggagcgcctcactacggagagcgtgcgcgcggagcgcatggcgtcgctcgcg
aagcgcgaccccacgcttggcgcggcgatctccgagctcgatctcgacctcctcgattga
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