Gemmatirosa kalamazoonensis: J421_2927
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Entry
J421_2927 CDS
T03025
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gba03009
]
J421_2927
Enzymes [BR:
gba01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J421_2927
Ribosome biogenesis [BR:
gba03009
]
Prokaryotic type
ribosomal protein modification factors
J421_2927
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AHG90464
UniProt:
W0RH66
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All DBs
Position
3396461..3397852
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AA seq
463 aa
AA seq
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MKVALVTLGCDKNTVDSERYLAQLVAHGAQPTDDLEAAEVILVNTCGFIDAAKQESIDAI
VDAGRLKVDGACQAVVAVGCMVQRHKSELAEALPEVDLFLGASEVDRLIPELAARGVVSP
DPLVAHPGVRLFAGELPHVRYLKVSEGCDHGCAFCAIPLMRGRHRSFSLDEIVREAQLLE
LQGAREVNLVAQDLAHYGRDRRDGTRLPELLEALVRETSIPWIRNLYLYSTGITPRLLEV
IAANPRILRYLDMPMQHASDAVLERMRRPERQRTIREKVARFRAAVPDLAIRTTCIVGFP
GETEADFQQLLDFLEEIRFDRVGAFTYSPQEGTRAYAMVDDVPEAIKRERLERLTDLQRA
ITAERYEEYAGRTTTLLVDRAAADGEPAQARAPWQADDVDGVTWLDTDAAAGSFVEARID
EVADDYDFVATPLRVVSAWSARRPGRRRALPTIALPTVGSYGR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtcgctctcgtcaccctcggctgcgacaagaacaccgtcgacagcgagcgctat
ctcgcccagctcgtcgcgcacggcgcgcagccgaccgacgatctggaggcggccgaggtg
atcctcgtgaacacgtgcggcttcatcgacgcggcgaagcaggagtcgatagacgccatc
gtcgacgcggggcggctcaaggtggacggcgcgtgtcaggccgtggtcgcggtgggctgc
atggtgcagcggcacaagagcgagctggccgaggcgctgccggaggtcgacctgttcctc
ggcgcgtcggaggtcgatcgcctgatcccggagctcgcggcgcgcggcgtggtgtcgccc
gacccgctggtcgcacatcccggcgtgcggctgttcgccggcgagctgccgcacgtgcgc
tacctcaaggtgagcgaggggtgcgatcacgggtgcgcgttctgcgcgatcccgctcatg
cgcgggcgccatcgctcgttctcgctcgacgagatcgtgcgcgaggcgcagctgctggag
ctgcagggcgcgcgcgaggtgaacctcgtggcgcaggatctcgcgcactacgggcgcgac
cgccgcgacggcacgcggctacccgagctgctcgaggcgctcgtgcgcgagacgtcgatt
ccgtggatccgcaatctctacctgtactcgacggggatcacgccgcggctgctcgaggtg
atcgcggcgaacccgcgcatcctgcgctacctcgacatgccgatgcagcacgcgtcggac
gcggtgctggagcgcatgcgccgccccgagcggcagcgcacgatccgcgagaaagtcgcg
cgcttccgcgccgccgtgcccgacctcgcgatccgcacgacgtgcatcgtcggcttcccg
ggcgagaccgaggccgacttccagcagctgctcgacttcctcgaggagatccgcttcgat
cgcgtcggcgcgttcacgtactcgccgcaggagggcacgcgcgcgtacgcgatggtcgac
gacgtgccggaggcgatcaagcgcgagcgcctcgagcgcctaacggatctgcagcgcgcg
atcacggcggagcgctacgaggagtacgcgggacgcacgacgacgctgctcgtcgaccgc
gcggccgcggacggcgagcccgcgcaggcgcgcgcgccgtggcaggcggacgacgtggac
ggcgtgacgtggctcgacaccgatgccgccgcgggctcgttcgtggaagcgcggatcgac
gaggtggcggacgactacgacttcgtggcgacgccgttgcgcgtggtgtcggcatggtcc
gcgcgccgaccgggccgcaggcgcgcgctgccgacgatcgcgttgccgacggtcgggagc
tacggtcgataa
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