Gemmatirosa kalamazoonensis: J421_2928
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Entry
J421_2928 CDS
T03025
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
J421_2928
Enzymes [BR:
gba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J421_2928
Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J421_2928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
AHG90465
UniProt:
W0RJF1
LinkDB
All DBs
Position
3397908..3399239
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AA seq
443 aa
AA seq
DB search
MQWTRNVGRALTAATLGAVLAMACAQRAGPRASRPTPPRSSAGGEVAALLNGRVARVALA
TGATLPVFGGTGEWRVFGEDARSPLARVSGGMEWRVERRGLQLRAVGPDGATPWRDGPLV
ARATTSDGYLTFNGRRWRGELWAHATNAGIAVVNRVAVEDYLRGVVPLELDAPAPADAAA
LQAQAVAARSYVYSRLPEFEPRDVAIRQAALPYDLRATTSDQVYGGVDAERAAADRAVAS
TTGLVIRYAGAVVSAPYHSSCGGSTADPDELWQSENEPWLRRVSDRIPGTDRYYCDIAPR
FRWTRTWDEATLRGVLDRYLRAGSGARVPVGAVRDVAVSSRTASGRVGVLSIATDGGRAL
LRGNDIRFAVRSVGGDILPSTYFSVDAERGADGRLARLTIRGNGNGHGVGMCQWGAVGRA
RAGQDFRAILRAYFPGATVERAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggacgcggaacgtgggccgggcgctgaccgcggcgacgttaggcgccgtgctg
gcgatggcgtgtgcgcagcgcgccgggccgcgggcctcacgcccgacgccgccgcgcagc
tcggcgggtggcgaggtggcggcgttgctcaacggacgcgtggcgcgcgtggcgctcgcc
accggcgcgacgctccccgtgttcggtggcaccggcgagtggcgcgtgttcggcgaggac
gcgcgctcgccgctcgcgcgcgtgagcgggggcatggagtggcgcgtggagcggcgcggg
ctgcagctgcgcgcggtgggccccgacggcgcgacgccgtggcgcgacgggccgctggtc
gcgcgcgcgacgacgtccgacggctatctcacgttcaacggccggcgctggcgcggcgag
ctgtgggcgcacgcgacgaacgcgggcatcgcggtcgtgaatcgcgtcgcggtggaggac
tatctgcgcggcgtggtgccgctggagctcgacgcgcccgcaccggcggatgccgcggcg
ctgcaggcgcaggccgtggcggcgcgcagctacgtgtacagccgcctgcccgagttcgag
ccgcgcgacgtcgcgatccgtcaggccgcgctgccgtacgacctgcgcgcgacgacgagc
gaccaggtgtacggcggcgtcgacgccgagcgtgccgcggccgatcgcgcggttgcgagc
acgacggggctcgtcatccgctatgcgggcgccgtggtgtcggcgccgtatcactcgtcg
tgcggcggcagcaccgcggatcccgacgagctgtggcagtcggagaacgagccatggctg
cggcgcgtgagcgatcgcatcccgggcacggatcgctattactgcgacatcgcgccgcgc
ttccggtggacgcgcacgtgggacgaggcgacgctgcgcggcgtgctcgatcgctacctg
cgcgcgggcagcggtgcacgcgtgccggtgggcgccgtgcgcgacgtcgcggtgtcgtcg
cgcacggccagcggccgggtcggcgtgctgtcgatcgcgacggacggaggacgcgcgctg
ctgcgcggcaacgacattcgcttcgccgtgcgctcggtcggtggcgatatcctgccgagc
acctatttttccgtcgacgcggagcggggcgcggacgggcgcctcgcgcgcctgacgatt
cgcggaaatggcaacggtcacggagtggggatgtgtcagtggggcgccgtcgggcgcgcg
cgtgccggccaggacttccgcgcgatcctgcgggcgtacttcccgggcgcgacggtggag
cgcgcggaatga
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