Gemmatirosa kalamazoonensis: J421_3029
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Entry
J421_3029 CDS
T03025
Name
(GenBank) Glycoside hydrolase, family 20, catalytic core
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00511
Other glycan degradation
gba00520
Amino sugar and nucleotide sugar metabolism
gba00600
Sphingolipid metabolism
gba01100
Metabolic pathways
gba04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
J421_3029
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
J421_3029
00511 Other glycan degradation
J421_3029
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
J421_3029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gba03110
]
J421_3029
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
J421_3029
Chaperones and folding catalysts [BR:
gba03110
]
Intramolecular chaperones
Others
J421_3029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
Glyco_hydro_67N
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AHG90566
UniProt:
W0RIF2
LinkDB
All DBs
Position
complement(3515729..3517849)
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AA seq
706 aa
AA seq
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MSIVRRALAPVAALALGGALPCRAAAQSPLPLVPAPREATAGAPFAAPGGVAVDAPADAG
DRGTATDLSDVLRERGQLAAARGGAVARVRLLRRESAAGRAALARAGLAFDAAMTPEGYV
LVADGGRVDVVGATSAGVLYGAQTVKQLVEGRGTATRVLGARVRDWPAMRWRGFHDDISR
GPVPTLEFQKKQIRTFAAYKMNVYSPYFEHTLAYASDPLFAAPGGAVTRAQARELVEYAR
RYHVEIVPEQEAFGHLHHVLTWEKYTPIGETERGSVLAPEDPRTIPLVTRLFTELDSLFP
GRFLHIGADETFDLGRGRTADEVRAQGYGAVYASFVARIASALKPLNRRLVVWGDIASDH
PELVPMLPKDMIAVPWNYDLPLASYDKLLQPFRAAGLETWVAPGVSSWNRVYPNNDVALQ
NIRAFVREGQKAGATGVLNTSWDDFGEGLFNQQWLGVIFGAAASWQAGDSDPAPALAAYA
RDFHGDTTGHVAEAERRLIAAHALLRTAGLGDASDRLFWVDPLSPEGQLVAARLLPVARD
LRLAAEDAIEHVIAARRAGATREPDALDAIELGARRVDAIGLKFQLADDVQRIYARVYAM
NRDTARARDLRWYDLADVTGINGRLQDLRDLFSQTRDLYEAAWLRENRPYWLRNVLARYD
EATQLWVRRIDRLNDVRSRWARDHTMPPGDSLGIPAPVTRVPPKAP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatcgttcgtcgcgcgctcgcgccggtcgcggcgctcgcgttaggcggcgcgctt
ccctgccgggccgccgcgcagtccccactcccgctcgtccccgcgccgcgcgaggctacg
gcgggtgcgccgttcgccgcgcccggcggggtcgccgtggacgcgcccgccgatgcgggc
gaccgcggcacggcgacggatctgagcgacgtgctgcgcgagcgcggtcagctcgccgcg
gcgcgtgggggagccgtggcgcgggtgcggctgctgcggcgcgagtcggcggccgggcgc
gccgcgctcgcgcgtgccggactcgcgttcgacgccgcgatgacgcccgagggctacgtg
ctcgtcgccgacggcgggcgcgtcgacgtggtgggcgcgacgtcggccggcgtgttgtac
ggcgcccagacggtgaagcagctcgtggaggggcgcggcaccgcgacgcgcgtgctcggc
gcgcgcgtgcgcgactggccggcgatgcgctggcgcggcttccacgacgacatctcgcgc
ggcccggtgccgacgctcgagttccagaagaagcagatccgcacgttcgccgcgtacaag
atgaacgtgtactcgccgtacttcgagcacacgctggcgtacgcgtcggacccgctgttc
gcggcgcccggcggtgccgtcacgcgcgcgcaggcgcgcgagctcgtggagtacgcgcgc
cgctaccacgtggagatcgtgcccgagcaggaggcgttcgggcacctgcaccacgtgctg
acgtgggagaagtacacgccgatcggcgagacggagcgcggcagcgtgctcgcgccggag
gatccacggacgatcccgctcgtcacgcggctgttcaccgagctggactcgctgttcccc
ggccgcttcctgcacatcggcgccgacgagacgttcgacctcggacgcgggcgcacggcc
gacgaggtgcgcgcgcagggctacggcgccgtgtacgcgagcttcgtcgcccggatcgcg
agcgcgttgaagccgctgaaccgtcggctcgtcgtctggggcgacatcgcgagcgaccat
ccggagctcgtgcccatgctgccgaaggacatgatcgcggtgccgtggaactacgatctc
ccgctcgcgtcgtacgacaagctgttgcagccgttccgcgcggcggggctcgagacgtgg
gtggcgcccggcgtgtcgagctggaaccgcgtctacccgaacaacgacgtcgcgctccag
aacatccgcgcgttcgtgcgcgaggggcagaaggccggtgccacgggcgtgttgaacacg
tcgtgggacgacttcggcgaggggctgttcaaccagcagtggctcggcgtgatcttcggc
gccgccgcgtcgtggcaggcgggcgacagcgatcctgcgccggcgctcgccgcctacgcg
cgcgacttccacggcgacaccacgggccacgtcgcggaagcggagcgacggctcatcgcc
gcgcacgcgctgctgcgcaccgcgggactcggcgacgcgagcgaccgactgttctgggtc
gacccgctgtcgcccgaggggcagctcgtcgccgcgcggctgctgccggtcgcgcgcgat
ctgcggctcgccgccgaggacgcgatcgagcacgtgatcgcggcgcgccgggccggcgcc
acgcgcgagcccgacgcgctcgacgcgatcgagctcggcgcgcgtcgcgtcgacgcgatc
ggcctgaagttccagctcgccgacgacgtgcagcgcatctacgcgcgcgtctacgcgatg
aaccgcgacaccgcgcgggcccgcgacctccgctggtacgacctggccgacgtgacgggc
atcaacggccggctgcaggatctccgcgacctgttctcgcagacgcgcgacctgtacgag
gcggcgtggctgcgcgagaatcgcccgtactggctccgcaacgtgctcgcgcgctacgac
gaggcgacgcagctctgggtgcgccgcatcgaccgcctgaacgacgtgcgctcgcgctgg
gcacgggaccacaccatgccgcccggcgactcgctcggcatcccggcgcccgtcacgcgc
gtgccgccgaaggcaccgtag
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