Gemmatirosa kalamazoonensis: J421_3186
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Entry
J421_3186 CDS
T03025
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gba03021
]
J421_3186
03009 Ribosome biogenesis [BR:
gba03009
]
J421_3186
Transcription machinery [BR:
gba03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
J421_3186
Ribosome biogenesis [BR:
gba03009
]
Prokaryotic type
rRNA transcription factors
J421_3186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
L27
Motif
Other DBs
NCBI-ProteinID:
AHG90723
UniProt:
W0RMS9
LinkDB
All DBs
Position
3699453..3700796
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AA seq
447 aa
AA seq
DB search
MVASPDILNALRELTNAKQLDRAELQGLLQDGILAALAKKYGPTVNAEVDIDDETGQIRI
TLLYTVVAEVTDAAREISLDEARFEDEEFQVGDILERPVEFAEFGRAAVQAAKQRIIQRV
REGERTRIKDEFSTKVGELLSGEVQQIERGKLVVMLNRFREAEAIIPYREQNHREHYHQG
EPIRAVLKRVEDTPKGPRLILSRSDALFVQALFRLEVPEIQQNIVEIRAAAREVGSRTKI
AVFSRDDSVDPVGACVGLKGARVQAVVNELGGERIDIVPWSADPERFAKLALAPAKVARV
FSDAGSRTIQAIVDDDQLSLAIGRNGQNVRLASELTGWKIDLYSSREWLEKGGEERLFGA
PEVEEEVPDVRLGDIAGIDPAIVAVLEDAGYRTLNDIIDLERDDFLRLPGIAPQEADRLI
GIIDELTTEEEDESGQASADESASAGD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggttgcatcgcctgacattctcaacgccctgcgcgagctgacgaacgcgaagcagctc
gaccgggccgagctccaggggctgctccaggacgggatcctcgcggccctcgcgaagaag
tacgggcccacggtcaacgccgaggtggacatcgacgacgagaccgggcagatccgcatc
acgctgctctataccgtcgtcgccgaggtcaccgatgcggcgcgtgagatctcgctcgac
gaggcgcgcttcgaggacgaggagttccaggtcggcgacatcctggagcggccggtcgag
ttcgcggagttcgggcgcgccgccgtgcaggcggcgaagcagcgcatcatccagcgcgtc
cgcgagggcgagcgcacccgcatcaaggacgagttctcgacgaaggtcggcgagctgctc
tccggcgaggtgcagcagatcgagcgcggcaagctggtcgtgatgctgaatcgcttccgc
gaggcggaggccatcatcccgtaccgcgagcagaaccaccgcgagcactaccaccagggc
gagccgatccgcgcggtgctgaagcgcgtagaggacacgccgaagggcccgcgcctcatc
ctgagccgttccgacgcgcttttcgtgcaggcgttgttccggctcgaggtccccgagatc
cagcagaacatcgtggagatccgcgcagccgcccgtgaggtcggcagccgcaccaagatc
gccgtcttctcgcgcgacgactcggtcgatccggtcggcgcgtgcgtcgggctgaagggc
gctcgcgtgcaggccgtcgtgaacgagctcgggggcgagcgcatcgacatcgtcccctgg
tcggccgatccggagcggttcgcgaagctcgcgctcgcgccggcgaaggtcgcccgcgtg
ttcagcgacgccgggtcgcgtacgatccaggccatcgtcgacgacgaccagctctcgctc
gcgatcgggcgcaacggccagaacgtgcgcctggcgtcggagctcaccggctggaagatc
gatctctactccagccgcgagtggctggagaagggcggcgaggagcggctgttcggcgcg
cccgaggtcgaggaggaagtgcccgacgtccggctgggcgacatcgcggggatcgatccg
gcgatcgtggccgttctcgaggatgccggctaccgtacgttgaacgatatcattgatttg
gagcgggacgacttcctccgccttcccggcatcgcgccgcaggaggccgatcggctcatc
ggcatcatcgacgagctgaccacggaggaggaagacgaatcgggtcaggcgtcggccgac
gagtcggccagcgccggagactga
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