Gemmatirosa kalamazoonensis: J421_3244
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Entry
J421_3244 CDS
T03025
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00300
Lysine biosynthesis
gba00470
D-Amino acid metabolism
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
gba01120
Microbial metabolism in diverse environments
gba01230
Biosynthesis of amino acids
Module
gba_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J421_3244
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J421_3244
Enzymes [BR:
gba01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J421_3244
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AHG90781
UniProt:
W0RJ39
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Position
complement(3765465..3766283)
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AA seq
272 aa
AA seq
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MAERGREFYKMCGSGNDFVFFDARDQAPGALETPELIQRMCARGTGIGADGVVFLERSAA
ATVGLRYFNSDGSPASLCGNATLCTARLAVELGAADPSGFTIATDAGVMAARFRDARPEI
DFAPVQELTADAPVRSGAAERRIGYARAGVPHLVVEVPDIEAVPLASRGRELRFDAALRD
GANVNFVAPGPDGAWYMRTYERGVEGETLACGTGAVATAAVLGAWGAADGPATTIVTRSG
RPLVITRGAAGRGPSLAGEGRIVFVGRLREVE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagcgtgggcgggagttctacaagatgtgcggctcggggaacgatttcgtgttc
ttcgacgcacgcgaccaggcgccgggagctctcgagacgcccgagctcatccagcggatg
tgcgcccgtggcaccgggatcggagccgacggtgtggtgttcctcgagcgatccgcggcg
gccacggtcgggctccggtacttcaacagcgacggctcgccggcgtcgctgtgcggcaac
gcgaccctgtgcacggcccgtctcgccgtcgagctcggggccgccgacccgtcggggttc
acgatcgcgaccgacgccggggtgatggccgcccggttccgggacgcccggccggagatc
gacttcgcgccggtccaggagctgaccgccgacgcgccggtccggtccggggcggcggag
cgacggatcggctacgcgcgggccggggtgccgcatctcgtcgtggaggtgccggacatc
gaggcggtgccgctggccagccgggggcgggagctgcggttcgacgcggcgctgagggac
ggcgccaacgtcaacttcgtcgcgccggggcccgacggcgcctggtacatgcggacctac
gagcgcggtgtcgagggtgagacgttggcgtgcggcaccggcgccgtcgcgaccgcggcc
gtcctcggcgcgtggggtgccgccgacggtccggcgacgacgatcgtgacgcgctcgggg
cggccgctggtcatcacgcggggcgcggcgggacgcggcccgtcgctggccggcgagggg
cggatcgtgttcgtcggtcggctccgcgaagtggaatag
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