Gemmatirosa kalamazoonensis: J421_3299
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Entry
J421_3299 CDS
T03025
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00020
Citrate cycle (TCA cycle)
gba00190
Oxidative phosphorylation
gba00650
Butanoate metabolism
gba00720
Other carbon fixation pathways
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
gba01120
Microbial metabolism in diverse environments
gba01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J421_3299
00650 Butanoate metabolism
J421_3299
09102 Energy metabolism
00190 Oxidative phosphorylation
J421_3299
00720 Other carbon fixation pathways
J421_3299
Enzymes [BR:
gba01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
J421_3299
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
NAD_binding_8
HI0933_like
Pyr_redox
GIDA
AlaDh_PNT_C
YjeF_N
Tubulin_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHG90836
UniProt:
W0RJ93
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Position
complement(3821722..3823638)
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AA seq
638 aa
AA seq
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MELNARIPDGPIEQKWDKARFDMKLVNPANKRKYHVIVVGSGLAGGAAAASLSELGYNVT
CFCYQDSPRRAHSIAAQGGINAAKNYHNDGDSVFRLFYDTIKGGDFRAREANVYRLSQNS
LNIIDQAVAQGVPFAREYSGLLDNRSFGGAQVSRTFYARGQTGQQLLLGCYQALEKEVAK
GGVTMIPRTDMIDLIVVNGRARGIVVRDQMTGEVRAHVADAVILCTGGYGNVFYLSTNAK
GCNTTAIWRAYKKGAAFGNPCYTQIHPTCIPVHGEYQSKLTLMSESLRNDGRVWVPKRRE
DCGKRPEDIAEQDRDYYLERKYPSFGNLSPRDIASRAAKQVCDEGRGVGEGGRGVYLDFR
DAIQRLGRKKIEERYGNLFEMYERITAEDPYKVPMRIYPAVHYTMGGLWVDYNLMSTVPG
LFVGGEANFSDHGANRLGASALMQGLSDGYFILPNTIGNYFGSTKVEPLAADSPEVRAAV
AAGAARVEKLLSVNGKRSVASFHRELGAIMWEKCGMARNRQGLTEALQEIPALREEFWRN
VTVPGGNTTLNQTLEHALRVADFMELAELMCRDALHREESCGGHFREEYQTEDGEALRDD
DNFAYVAAWEYTGDDSEPRLHKEPLQFEYVHLQQRSYK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaacgcacggatccccgacggaccgatcgagcagaagtgggacaaggcccgc
ttcgacatgaagctcgtgaacccggccaacaagcggaaatatcacgtcatcgtcgtcggc
agcgggctcgccggcggggcggcggcggcgtcgctgagtgagctgggctacaacgtcacc
tgcttctgctaccaggactcgccgcgccgcgcgcactccatcgccgcgcagggcggcatc
aacgcggcgaagaactaccacaacgacggcgactccgtcttccgcctgttctacgacacg
atcaagggcggcgacttccgcgcgcgcgaggcgaacgtgtaccgcctgtcgcagaactcg
ctgaacatcatcgaccaggcggtcgcgcagggtgtgccgttcgcccgcgagtacagcggg
ctgctcgacaaccgctcgttcggcggcgcgcaggtctctcggacgttctacgcgcgcggg
cagactggccagcagctcctgctcggctgctaccaggcgctcgagaaggaggtggcgaag
ggcggcgtgacgatgatcccgcgcaccgacatgatcgacctcatcgtggtcaacgggcgc
gcccgcggcatcgtcgtgcgcgaccagatgaccggcgaggtgcgggcgcacgtcgccgac
gcggtgatcctgtgcacgggcggctacggcaacgtgttctacctctccacgaacgcgaag
gggtgcaacacgacggcgatctggcgcgcgtacaagaagggcgccgcgttcggcaacccg
tgctacacgcagatccacccgacgtgcatcccggtgcacggcgagtatcagtcgaagctc
acgctgatgtcggagtcgctccgcaacgacggccgcgtgtgggtgccgaagcgccgcgag
gactgcggcaagcgccccgaggacatcgcggagcaggatcgcgactactacctcgagcgg
aagtatccgagcttcggcaacctgtcgccgcgcgacatcgcgagccgcgccgcgaagcag
gtgtgcgacgagggacgcggcgtcggcgagggcggccgcggcgtgtacctcgacttccgc
gacgccatccagcgactcggccggaagaagatcgaggagcgctacggcaacctgttcgag
atgtacgagcggatcaccgccgaggatccgtacaaggtgccgatgcgcatctaccccgcc
gtgcactacacgatgggcggcctgtgggtcgactacaacctgatgagcaccgtgcccggc
ctgttcgtcggcggcgaggcgaacttctccgaccacggggcgaatcggttaggcgcgtcg
gcgctcatgcaggggctcagcgacggctacttcatcctgccgaacacgatcggcaactac
ttcggctcgacgaaggtcgagccgctggccgccgactcgcccgaggtccgcgcggcggtg
gcggcgggtgcggcgcgcgtggagaagctgctctcggtgaacggcaagcgctcggtggcg
agcttccaccgcgagctcggcgcgatcatgtgggagaagtgcggcatggcgcgcaaccgg
caggggctcaccgaggcgctgcaggagatcccggcgctgcgggaggagttctggcgcaac
gtcacggtgccgggcgggaacacgacgctgaaccagacgctggagcacgcgctccgcgtg
gcggacttcatggagctcgcggagctgatgtgccgcgacgcgctgcaccgcgaggagtcg
tgcggcggccacttccgcgaggagtaccagaccgaggacggcgaggcgctgcgcgacgac
gacaacttcgcctacgtcgcggcctgggagtacacgggcgacgattcggagccgcgactg
cacaaggagccgctgcagttcgagtacgtgcacctgcagcagcggagctacaagtaa
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