Gemmatirosa kalamazoonensis: J421_3305
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Entry
J421_3305 CDS
T03025
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gba03032
]
J421_3305
03036 Chromosome and associated proteins [BR:
gba03036
]
J421_3305
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_3305
DNA replication proteins [BR:
gba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J421_3305
Chromosome and associated proteins [BR:
gba03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J421_3305
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J421_3305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-HIG
YtxC
Motif
Other DBs
NCBI-ProteinID:
AHG90842
UniProt:
W0RK80
LinkDB
All DBs
Position
complement(3827366..3827698)
Genome browser
AA seq
110 aa
AA seq
DB search
MTKADLVERVTATIARTAGPTISKKDCARVVDSFLDAIKDALHEQRNIEVRGFGTFKIRQ
RKTRMARNPRTGSPVEVSARPVPVFKPSKELRALVAGVDVSEITEAELAD
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagccgatctggtcgaacgcgtcactgccacgattgcccgcaccgcgggaccg
accatctcgaagaaggactgcgcgagagtggtcgattccttcctcgacgcgatcaaggac
gcgctgcacgagcagcgcaacatcgaggtgcgaggcttcgggacgttcaagatccgccag
cgcaagacgcgcatggcgcgcaacccccgcaccggatcgcccgtcgaggtctccgcccgc
cccgtaccggtgttcaagccctccaaggagttacgcgctctcgtcgccggagtcgacgtg
agcgagatcaccgaggccgaactggccgactga
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