Gemmatirosa kalamazoonensis: J421_3389
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Entry
J421_3389 CDS
T03025
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00300
Lysine biosynthesis
gba00470
D-Amino acid metabolism
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
gba01120
Microbial metabolism in diverse environments
gba01230
Biosynthesis of amino acids
Module
gba_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J421_3389
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J421_3389
Enzymes [BR:
gba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J421_3389
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHG90926
UniProt:
W0RJH1
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All DBs
Position
complement(3917570..3918880)
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AA seq
436 aa
AA seq
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MGQGVLSAAAVGPDFEPGFSSRDGELYCDAVPAGHIAEAVGTPAYVYSAGVVRQQYRRLD
AALGGVPHRVHYSVKANSNLAILRLLQAEGAGVDIVSGGELYRAREAGFAGRDIVFSGVG
KTARELDEALAEGVLFVNVESEGELVVLDEVARARGMVAPVALRVNPEVMVDSPHHYIRT
GEKGHKFGIPYDDVRDAARLTRSLPNVELVGIDMHIGSQLSSFEPYADALERVSALVTQL
RADDFDRIRYLDVGGGLGVVYRDEPATDVERYAEGVARAARALDVTLVLEPGRFLVAEAG
LLLTKVLYRKRSGGKEYVITDAGMNDLLRPSHYEAFHEIVATRPRGHRVVADVVGPVCES
GDFLARNRVVDDARPGDVLGIRTAGAYGFVMASNYNSRPRPAEVLVDGDRYAVVTERERY
EDLVRQERAALDWRTA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgggccagggcgtactgagcgcggccgcggtgggaccggacttcgagccgggcttttcc
tcgcgagacggagagctgtactgcgacgcggtgccggcgggacacatcgcggaggcggtg
ggcacgccggcctacgtgtacagcgccggcgtggtgcggcagcagtaccggcgcctcgac
gcggcgttgggcggcgtgccgcaccgcgtgcactacagcgtgaaggcgaactcgaacctc
gcgatcctgcgcctgctgcaggccgagggcgcgggcgtcgacatcgtctcgggcggcgag
ctgtatcgcgcgcgcgaggccggattcgccgggcgcgacatcgtgttcagcggcgtcggc
aagacggcgcgcgagctggacgaggcgctcgccgagggcgtgctgttcgtcaacgtcgag
agcgagggcgagctcgtggtgctcgacgaggtggcgcgcgcgcggggcatggtggcgccg
gtggcgctgcgcgtgaaccccgaggtgatggtcgacagtccgcaccactacatccgcacc
ggcgagaaggggcacaagttcggcatcccgtacgacgacgtgcgcgacgccgcgcggctc
acgcgatcactgcccaacgtggagctggtcggcatcgacatgcacatcggctcgcagctc
tcgagcttcgagccgtacgccgacgcgctcgagcgcgtctcggcgctcgtcacgcagctg
cgcgcggacgacttcgaccgcatccgatacctggacgtcggcggcggactcggcgtcgtg
taccgcgacgagccggcgacggacgtggagcgctacgcggagggcgtcgcgcgtgcggcg
cgcgcgctggacgtgacgctcgtcctcgagccgggtcgcttcctcgtcgccgaggcgggg
ctgctcctcacgaaggtgctgtaccgcaagcggagcggcggcaaggagtacgtcatcacc
gacgcggggatgaacgatctactgcggccgtcgcactacgaggcgttccacgagatcgtc
gccacgcggccccgcggacatcgcgtggtggcggacgtcgtggggccggtgtgcgagagc
ggcgacttcctcgcgcgcaaccgcgtggtggacgacgcgcgcccgggcgacgtgttgggc
atccgcacggcgggcgcgtacggcttcgtgatggcgtcgaactacaactcgcggccgcgc
cccgccgaggtgctcgtggacggcgaccgctatgccgtggtgacggagcgggagcggtac
gaggacctcgtgcgtcaggagcgcgccgcgctggactggaggaccgcgtga
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