KEGG   Gemmatirosa kalamazoonensis: J421_3389
Entry
J421_3389         CDS       T03025                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
gba  Gemmatirosa kalamazoonensis
Pathway
gba00300  Lysine biosynthesis
gba00470  D-Amino acid metabolism
gba01100  Metabolic pathways
gba01110  Biosynthesis of secondary metabolites
gba01120  Microbial metabolism in diverse environments
gba01230  Biosynthesis of amino acids
Module
gba_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gba00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    J421_3389
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    J421_3389
Enzymes [BR:gba01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     J421_3389
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AHG90926
UniProt: W0RJH1
LinkDB
Position
complement(3917570..3918880)
AA seq 436 aa
MGQGVLSAAAVGPDFEPGFSSRDGELYCDAVPAGHIAEAVGTPAYVYSAGVVRQQYRRLD
AALGGVPHRVHYSVKANSNLAILRLLQAEGAGVDIVSGGELYRAREAGFAGRDIVFSGVG
KTARELDEALAEGVLFVNVESEGELVVLDEVARARGMVAPVALRVNPEVMVDSPHHYIRT
GEKGHKFGIPYDDVRDAARLTRSLPNVELVGIDMHIGSQLSSFEPYADALERVSALVTQL
RADDFDRIRYLDVGGGLGVVYRDEPATDVERYAEGVARAARALDVTLVLEPGRFLVAEAG
LLLTKVLYRKRSGGKEYVITDAGMNDLLRPSHYEAFHEIVATRPRGHRVVADVVGPVCES
GDFLARNRVVDDARPGDVLGIRTAGAYGFVMASNYNSRPRPAEVLVDGDRYAVVTERERY
EDLVRQERAALDWRTA
NT seq 1311 nt   +upstreamnt  +downstreamnt
gtgggccagggcgtactgagcgcggccgcggtgggaccggacttcgagccgggcttttcc
tcgcgagacggagagctgtactgcgacgcggtgccggcgggacacatcgcggaggcggtg
ggcacgccggcctacgtgtacagcgccggcgtggtgcggcagcagtaccggcgcctcgac
gcggcgttgggcggcgtgccgcaccgcgtgcactacagcgtgaaggcgaactcgaacctc
gcgatcctgcgcctgctgcaggccgagggcgcgggcgtcgacatcgtctcgggcggcgag
ctgtatcgcgcgcgcgaggccggattcgccgggcgcgacatcgtgttcagcggcgtcggc
aagacggcgcgcgagctggacgaggcgctcgccgagggcgtgctgttcgtcaacgtcgag
agcgagggcgagctcgtggtgctcgacgaggtggcgcgcgcgcggggcatggtggcgccg
gtggcgctgcgcgtgaaccccgaggtgatggtcgacagtccgcaccactacatccgcacc
ggcgagaaggggcacaagttcggcatcccgtacgacgacgtgcgcgacgccgcgcggctc
acgcgatcactgcccaacgtggagctggtcggcatcgacatgcacatcggctcgcagctc
tcgagcttcgagccgtacgccgacgcgctcgagcgcgtctcggcgctcgtcacgcagctg
cgcgcggacgacttcgaccgcatccgatacctggacgtcggcggcggactcggcgtcgtg
taccgcgacgagccggcgacggacgtggagcgctacgcggagggcgtcgcgcgtgcggcg
cgcgcgctggacgtgacgctcgtcctcgagccgggtcgcttcctcgtcgccgaggcgggg
ctgctcctcacgaaggtgctgtaccgcaagcggagcggcggcaaggagtacgtcatcacc
gacgcggggatgaacgatctactgcggccgtcgcactacgaggcgttccacgagatcgtc
gccacgcggccccgcggacatcgcgtggtggcggacgtcgtggggccggtgtgcgagagc
ggcgacttcctcgcgcgcaaccgcgtggtggacgacgcgcgcccgggcgacgtgttgggc
atccgcacggcgggcgcgtacggcttcgtgatggcgtcgaactacaactcgcggccgcgc
cccgccgaggtgctcgtggacggcgaccgctatgccgtggtgacggagcgggagcggtac
gaggacctcgtgcgtcaggagcgcgccgcgctggactggaggaccgcgtga

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