Gemmatirosa kalamazoonensis: J421_3420
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Entry
J421_3420 CDS
T03025
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
J421_3420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gba03011
]
J421_3420
Ribosome [BR:
gba03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
J421_3420
Bacteria
J421_3420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
RNase_II_C_S1
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
AHG90957
UniProt:
W0RKJ1
LinkDB
All DBs
Position
complement(3951651..3953462)
Genome browser
AA seq
603 aa
AA seq
DB search
METPSGMAELENPTLDADFDASTTPTALTERQKRDKQKSVLRPLANRRPELYDEDEYSSD
EFEAMMDMYNGTLASIEEGEIVKSKVLEIRENMVVLDIGFKSEGTVPLEEFKDMPDLKPG
DEVEVLLEHLEDQEGSVVLSKKKADFMRVWERIRLAYENDQPVEGTLVKKIKGGVVVDLM
GVDAFLPGSQIALRRVPNIDELLGQRYEFKIIKLNKRRRNIVVSRRVILEQERAGKREKL
MKELEKDQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSWGRISHPSEMVQIGQELEVKV
LDIDWERERISLGLKQLQAYPWKDVVQKYPVGTRVQGKVVSITNYGAFIELEPGIEGLVH
ISEMSWTRNVRHPSKLVSIGETIEAVVLKVDPEEEKISLGMKQTETDPWTVLPLKYPVGT
RITGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDTVDVVILNIDSD
NKRISLGLKQAEEDPWLRIGETYPVGTELQNRPIVRLMDKGVVVDVGNDIEGFVPLSQLN
ITGKIVQNPADVAYEGMLLDLRVLEVDPIHRRIVLAVTNIPEEQPPRPETPSTVHSSEGE
PGI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccctccggtatggccgagctcgagaaccccacgctcgacgctgacttcgac
gcgtcgaccaccccgacggcgctgaccgagcgccagaagcgcgacaagcagaagagcgtt
ctgcgtcccctcgcgaaccgccgccccgagctctacgacgaggacgagtactcgtcggac
gagttcgaggcgatgatggacatgtacaacggtaccctcgcctccatcgaggagggggag
atcgtgaagtccaaggtcctcgagatccgcgagaacatggtcgtcctcgacatcggcttc
aagtccgaggggaccgtgccgctcgaggagttcaaggacatgcccgacctcaagcctggc
gacgaggtcgaggttctcctggagcacctcgaggaccaggaaggctccgtcgtcctctcg
aagaagaaggcggacttcatgcgcgtctgggagcgcatccgtctcgcctacgagaacgac
cagcccgtcgagggcacgctcgtcaagaagatcaagggcggcgtggtcgtcgacctcatg
ggcgtcgacgcgttcctcccgggctcgcagatcgcgctccgccgcgtgccgaacatcgac
gagctgctcggccagcgctacgagttcaagatcatcaagctgaacaagcgccgccgcaac
atcgtcgtctcccgccgagtgatcctcgagcaggagcgcgccggcaagcgcgagaagctg
atgaaggagctcgagaaggatcaggtgcggaagggcgtggtgaagaacatcacggacttc
ggcgccttcatcgacctcggcggcgtcgacggcctgctccacatcacggacatgtcgtgg
gggcgcatctcgcaccccagcgagatggtccagatcgggcaggagctcgaggtgaaggtc
ctggacatcgactgggagcgcgagcgcatctcgctcggcctcaagcagctccaggcgtac
ccgtggaaggacgtggtccagaagtatcccgtcggcacgcgggtgcagggcaaggtcgtc
tcgatcacgaactacggcgcgttcatcgagctggagcccgggatcgagggcctcgtccac
atctccgagatgtcgtggacgcggaacgttaggcacccgtcgaagctcgtctccatcggc
gagacgatcgaggcggtggtgctgaaggtcgatccggaggaggagaagatctccctcggc
atgaagcagacggagacggatccgtggacggtgctgccgctcaagtacccggtgggtacg
cgcatcaccggcaaggtccgcaacctcacgagcttcggcgcgttcgtcgagatcgagccc
ggcatcgacggcctcattcacatctccgacatgagctggacgaagcgcgtccagcatccg
tcggaggtcgtgaagaagggcgacacggtcgacgtcgtgatcctcaacatcgacagcgac
aacaagcgcatctcgctcggcctcaagcaggccgaggaggatccatggctccgcatcggt
gagacctacccggtcggcaccgagctgcagaaccgcccgatcgtgcgcctgatggacaag
ggcgtggtcgtcgacgtcggcaacgacatcgagggcttcgtgccgctgtcgcagctcaac
atcacgggcaagatcgtccagaacccggccgacgtggcgtacgagggcatgctcctcgac
ctccgcgtcctcgaggtggatccgatccaccgccggatcgtgctcgcggtgacgaacatc
cccgaggagcagccgccgcggcccgagacgccgtcgacggtgcactccagcgagggcgag
ccgggcatctga
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