KEGG   Gemmatirosa kalamazoonensis: J421_3420
Entry
J421_3420         CDS       T03025                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
gba  Gemmatirosa kalamazoonensis
Pathway
gba03010  Ribosome
Brite
KEGG Orthology (KO) [BR:gba00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    J421_3420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:gba03011]
    J421_3420
Ribosome [BR:gba03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    J421_3420
  Bacteria
    J421_3420
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 PCB_OB RNase_II_C_S1 MFD_D3
Other DBs
NCBI-ProteinID: AHG90957
UniProt: W0RKJ1
LinkDB
Position
complement(3951651..3953462)
AA seq 603 aa
METPSGMAELENPTLDADFDASTTPTALTERQKRDKQKSVLRPLANRRPELYDEDEYSSD
EFEAMMDMYNGTLASIEEGEIVKSKVLEIRENMVVLDIGFKSEGTVPLEEFKDMPDLKPG
DEVEVLLEHLEDQEGSVVLSKKKADFMRVWERIRLAYENDQPVEGTLVKKIKGGVVVDLM
GVDAFLPGSQIALRRVPNIDELLGQRYEFKIIKLNKRRRNIVVSRRVILEQERAGKREKL
MKELEKDQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSWGRISHPSEMVQIGQELEVKV
LDIDWERERISLGLKQLQAYPWKDVVQKYPVGTRVQGKVVSITNYGAFIELEPGIEGLVH
ISEMSWTRNVRHPSKLVSIGETIEAVVLKVDPEEEKISLGMKQTETDPWTVLPLKYPVGT
RITGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDTVDVVILNIDSD
NKRISLGLKQAEEDPWLRIGETYPVGTELQNRPIVRLMDKGVVVDVGNDIEGFVPLSQLN
ITGKIVQNPADVAYEGMLLDLRVLEVDPIHRRIVLAVTNIPEEQPPRPETPSTVHSSEGE
PGI
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggagaccccctccggtatggccgagctcgagaaccccacgctcgacgctgacttcgac
gcgtcgaccaccccgacggcgctgaccgagcgccagaagcgcgacaagcagaagagcgtt
ctgcgtcccctcgcgaaccgccgccccgagctctacgacgaggacgagtactcgtcggac
gagttcgaggcgatgatggacatgtacaacggtaccctcgcctccatcgaggagggggag
atcgtgaagtccaaggtcctcgagatccgcgagaacatggtcgtcctcgacatcggcttc
aagtccgaggggaccgtgccgctcgaggagttcaaggacatgcccgacctcaagcctggc
gacgaggtcgaggttctcctggagcacctcgaggaccaggaaggctccgtcgtcctctcg
aagaagaaggcggacttcatgcgcgtctgggagcgcatccgtctcgcctacgagaacgac
cagcccgtcgagggcacgctcgtcaagaagatcaagggcggcgtggtcgtcgacctcatg
ggcgtcgacgcgttcctcccgggctcgcagatcgcgctccgccgcgtgccgaacatcgac
gagctgctcggccagcgctacgagttcaagatcatcaagctgaacaagcgccgccgcaac
atcgtcgtctcccgccgagtgatcctcgagcaggagcgcgccggcaagcgcgagaagctg
atgaaggagctcgagaaggatcaggtgcggaagggcgtggtgaagaacatcacggacttc
ggcgccttcatcgacctcggcggcgtcgacggcctgctccacatcacggacatgtcgtgg
gggcgcatctcgcaccccagcgagatggtccagatcgggcaggagctcgaggtgaaggtc
ctggacatcgactgggagcgcgagcgcatctcgctcggcctcaagcagctccaggcgtac
ccgtggaaggacgtggtccagaagtatcccgtcggcacgcgggtgcagggcaaggtcgtc
tcgatcacgaactacggcgcgttcatcgagctggagcccgggatcgagggcctcgtccac
atctccgagatgtcgtggacgcggaacgttaggcacccgtcgaagctcgtctccatcggc
gagacgatcgaggcggtggtgctgaaggtcgatccggaggaggagaagatctccctcggc
atgaagcagacggagacggatccgtggacggtgctgccgctcaagtacccggtgggtacg
cgcatcaccggcaaggtccgcaacctcacgagcttcggcgcgttcgtcgagatcgagccc
ggcatcgacggcctcattcacatctccgacatgagctggacgaagcgcgtccagcatccg
tcggaggtcgtgaagaagggcgacacggtcgacgtcgtgatcctcaacatcgacagcgac
aacaagcgcatctcgctcggcctcaagcaggccgaggaggatccatggctccgcatcggt
gagacctacccggtcggcaccgagctgcagaaccgcccgatcgtgcgcctgatggacaag
ggcgtggtcgtcgacgtcggcaacgacatcgagggcttcgtgccgctgtcgcagctcaac
atcacgggcaagatcgtccagaacccggccgacgtggcgtacgagggcatgctcctcgac
ctccgcgtcctcgaggtggatccgatccaccgccggatcgtgctcgcggtgacgaacatc
cccgaggagcagccgccgcggcccgagacgccgtcgacggtgcactccagcgagggcgag
ccgggcatctga

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