Gemmatirosa kalamazoonensis: J421_3561
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Entry
J421_3561 CDS
T03025
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J421_3561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_3561
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J421_3561
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J421_3561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_33
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHG91098
UniProt:
W0RNR0
LinkDB
All DBs
Position
complement(4109444..4111555)
Genome browser
AA seq
703 aa
AA seq
DB search
MTDRAQFDLQAPFKPAGDQPRAIAELSRGLERGDRFQTLLGVTGSGKTMTVANVIKNHGR
PTLVLSHNKTLAAQLYGELKSFFPHNAVEYFISYYDYYQPEAYVPSSDTYIEKDASINED
IDRLRLRATSSLMERDDVVIVSTVSAIYGLGDPVEYRERMVTLARGQRIARDDILRQLVG
IQYNRNDVAFERGTFRVRGDTVEIFPAYEEQGVRVEMWGDEIERISKINVVTGETIATLE
KTAVYPAKHFITNRPTIERAVKAIRAELDERLGMLRAEGKLLEAQRLESRTNFDIEMMLE
IGTCAGIENYSRHLSGRTAGERPACLFDYFPDDFLVVVDESHVTLPQIRGMYNGDRARKL
TLVDYGFRLPSALDNRPLVFDEFLALTPRMIAVSATPGELELQLSEGAVVEQVIRPTGLV
DPEIEVRSVRGQVDDLLGEIRIRERKGERVLVTTLTKRMAEDLTDYLQQVGVRVRYMHSD
IDAIERMEIVRGLRLGEFDVLVGINLLREGLDMPEVSLVAILDADQEGFLRSDRSLIQTV
GRAARNVNGRAIFYADRITGSMQRCMEETARRRELQTKHNEEHGITPFTVEKSVADVRFV
TRVADARTEHEEEEAKGARRRDGKKKVAEGPAPYDLSDPAALIARLEGEMKQAAAALDFE
QAARLRDELFELRARFGDAVPNGSGDGAKARRPGTVADLRAAR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgcgcccagttcgatctccaggccccgttcaagcccgccggcgaccagccc
cgcgccatcgcggagctgagcagggggctggagcgcggcgatcgcttccagacgctcctc
ggcgtcaccggctccggcaagacgatgacggtcgcgaacgtcatcaagaaccacggccgg
cccacgctcgtcctgtcgcacaacaagacgctcgcggcgcagctgtacggggagctgaag
agcttcttcccgcacaacgcggtcgagtacttcatctcgtactacgactactaccagccc
gaggcctacgtcccgtcgagcgacacgtacatcgagaaggacgcgtcgatcaacgaggac
atcgaccggctgcggctgcgcgcgacgtcgagcctcatggagcgcgacgacgtcgtgatc
gtgtcgacggtgagcgcgatctacggcctcggcgacccggtggagtaccgcgagcggatg
gtcacgctcgcgcgcgggcagcgcatcgcgcgcgacgacatcctgcggcagctcgtcggc
atccagtacaaccggaacgacgtcgcgttcgagcgcggcacgttccgcgtgcgcggcgac
acggtcgagatcttccccgcgtacgaggagcagggcgtgcgcgtggagatgtggggcgac
gagatcgagcgcatctcgaagatcaacgtcgtcaccggcgagacgatcgcgacgctcgag
aagacggccgtctatccggcgaagcacttcatcacgaaccgtccgacgatcgagcgcgcg
gtgaaggccatccgcgccgagctggacgagcggctcggcatgctgcgcgccgaggggaag
ctgctcgaggcgcagcggctggagagccgcacgaacttcgacatcgagatgatgctcgag
atcgggacgtgcgcggggatcgagaactactcgcgccacctgagcggccgcaccgccggc
gagcgcccggcgtgcctgttcgactacttcccggacgacttcctcgtcgtcgtggacgag
agccacgtgacgctgccgcagatccgcggcatgtacaacggcgaccgcgcgcgcaagctg
acgctcgtcgactacggcttccggctgccgagcgcgctcgacaaccggccgctcgtgttc
gacgagttcctcgcgctcaccccgcgcatgatcgccgtgagcgcgacgccgggtgagctg
gagctgcagctcagcgagggcgcggtggtcgagcaggtcatccggccgacggggctcgtc
gatcccgagatcgaggtgcggtcggtgcgcgggcaggtggacgatctgctcggcgagatc
cgcatccgcgagcggaagggggagcgcgtgctcgtcacgacgctcaccaagcgcatggcg
gaggacctcaccgactacctccagcaggtcggcgtgcgcgtgcgctacatgcactccgac
atcgacgcgatcgagcgcatggagatcgtgcgcggcctgcggctcggcgagttcgacgtg
ctcgtggggatcaacctgctgcgcgaagggctcgacatgcccgaggtgtcgctcgtcgcg
atcctcgacgcggaccaggagggcttcctgcgcagcgaccgctcgctcatccagaccgtg
ggccgcgccgcgcgcaacgtgaacggccgcgcgatcttctacgccgaccgcatcacgggc
tcgatgcagcgctgcatggaggagacggcacgccgccgcgagctgcagacgaagcacaac
gaggagcacggcatcacgccgttcacggtggagaagagcgtcgccgacgtgcgcttcgtg
acgcgcgtggccgacgcccgcacggagcacgaggaggaggaagcgaagggcgcgcgtcgc
cgcgacgggaagaagaaggtggccgagggaccggcgccgtacgacctctcggatccggcg
gcgctcatcgcgcgcctggagggcgagatgaagcaggccgccgcggcgctggacttcgag
caggcggcgcgcctgcgcgacgagctgttcgagctgcgcgcgcggttcggcgacgcggtg
cctaacgggtccggcgacggcgcgaaggcgcgccgcccgggcaccgtcgccgacctccgc
gccgcacggtga
DBGET
integrated database retrieval system
