Gemmatirosa kalamazoonensis: J421_3576
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Entry
J421_3576 CDS
T03025
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J421_3576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gba03021
]
J421_3576
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_3576
Enzymes [BR:
gba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J421_3576
Transcription machinery [BR:
gba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J421_3576
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J421_3576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AHG91113
UniProt:
W0RNS5
LinkDB
All DBs
Position
complement(4131569..4132645)
Genome browser
AA seq
358 aa
AA seq
DB search
MATTIDLRGLVRPQLVEATKREDNLNVAEFRLQPLERGFGHTLGNSMRRLLLSSLRGAAV
WGFRIDGVVHEHQTIPGVVEDVHQIIGNLKTLTLTLDDDVETAVLRIQKTEAGPITAGDI
QGASGVRIVDAAHHLLTLQEDRELNIELYVNKGRGYVESDQHPVDRGLPVDLVRVDSIYN
PVRRANFAVAETRVGQRTDYDRLTLTVETNGTITPEEAVSYAAALAQTHFQYFAGFGSHA
AASVAAGGDGNGADALRMGDLLRTSIDDLELSVRSVNSLKNSNIRTLGDLVRQTENQILQ
VKNFGKKSLQEIADLLEREGLNFGMRYEEAGDGGVRITDWGTAPSRAAANAPEDDDEE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacgatcgatctccgcgggctcgtccggccgcagctcgtcgaagcgacgaag
cgcgaggacaacctgaacgtcgccgagttccgcctgcagccgctcgagcgcggcttcggg
cacacgctcggcaactccatgcgccgcctgctgctgtcgtcgctccgcggcgcggcggtg
tggggcttccgcatcgacggcgtcgtccacgagcaccagacgattccgggcgtcgtggag
gacgtgcaccagatcatcggcaatctgaagacgctcacgctgacgctcgacgacgacgtc
gagacggcggtgctgcgcatccagaagaccgaggcgggtccgatcaccgccggcgacatc
cagggcgccagcggcgtgcgcatcgtcgacgccgcgcaccacctcctcacgctccaggag
gaccgcgagctcaacatcgagctctacgtgaacaaggggcgcggctacgtcgagagcgac
cagcatccggtcgatcgcggcctgccggtcgatctcgtccgcgtggactcgatctacaac
ccggtgcgccgcgcgaacttcgcggtggccgagacgcgcgtcgggcagcgcacggactac
gatcggctcacgctgaccgtggagacgaacggcacgatcacgccggaagaggcggtgagc
tacgccgcggcgctcgcgcagacgcacttccagtacttcgccggcttcggctcgcacgcc
gcggccagcgtggcggcgggcggcgacggcaacggcgccgacgcgctgcggatgggtgac
ctgctccgcacgtcgatcgacgatctcgagctctcggtgcgcagcgtcaactcgctcaag
aactcgaacatccgcacgctcggcgatctggtgcgtcagacggagaaccagatcctgcag
gtcaagaacttcggcaagaagtccctccaggagatcgccgatctcctcgagcgcgagggg
ctgaactttggcatgcgctacgaggaagcgggcgacggcggagtgcggatcaccgattgg
ggcaccgcaccgagccgcgccgccgcgaacgcgccagaagacgacgacgaggagtaa
DBGET
integrated database retrieval system
