Gemmatirosa kalamazoonensis: J421_3731
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Entry
J421_3731 CDS
T03025
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00061
Fatty acid biosynthesis
gba00071
Fatty acid degradation
gba01100
Metabolic pathways
gba01212
Fatty acid metabolism
gba02024
Quorum sensing
gba04146
Peroxisome
Module
gba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J421_3731
00071 Fatty acid degradation
J421_3731
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J421_3731
09145 Cellular community - prokaryotes
02024 Quorum sensing
J421_3731
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gba01004
]
J421_3731
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gba04147
]
J421_3731
Enzymes [BR:
gba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J421_3731
Lipid biosynthesis proteins [BR:
gba01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
J421_3731
Exosome [BR:
gba04147
]
Exosomal proteins
Exosomal proteins of breast milk
J421_3731
Exosomal proteins of breast cancer cells
J421_3731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHG91268
UniProt:
W0RP81
LinkDB
All DBs
Position
complement(4307780..4309561)
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AA seq
593 aa
AA seq
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MSTPTRAERANAYAPSEMPRVPVRADALAHDTVLRRFLARAESTPDVAALRALAAGGAAA
DETITWSEWASAAACVAAALVSDGVRAGDRVAILAGNTPLWPIVDVGALLAGTIVVGLFP
TCTAAQADALLGDCGARVLLVDGAAQLAKVSPSDGRRIVSAATWDEWLDGGRRALADEAV
AAEIARRARAAAPDDVAGLIYTSGSTGEPKGACVSHEYLLASAESIADALKLVAGDSSLS
VLPYAHAAERVFGHYTRIVVGMEAGLVADASRLWEAARTFRPTVFGGLPRLYERARDALL
AARAAVPNEARLRWDELLRVGVDRSRLRRAGAAVPADLERAWASLRDVAAAPLASIFGDR
MRLATSGGAPLAPDVAEALDAMGVTVLGAYGQTEHLCVAFHRPDDYDFDSVGRPMLGTEL
RIAADGELLIGRGALTFAGYWGRPEATRDAFTDDGRWLRTGDLARIDERGRLAITGRKKE
LLALSTGKKVAPLPIEGRLAEHPRVAQAVVFGDGRKHVGALLFLRDGAAADDASLDAHVR
EVNATLAPHEQVRRWRAVPGELRESAGELTATLKVKRAVVAARHADAVEALFR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgccgacgcgtgccgagcgcgcgaacgcgtacgcgccgagcgagatgccgcgg
gtgccggttcgagcggacgcgctggcgcacgacacggtgctgcggcggttcctcgcgcgc
gcggagtcgacgcccgacgtcgcggcgctgcgcgcgctggcggccggcggcgcggcggcg
gacgagacgatcacgtggagcgagtgggcatcggcggcggcgtgcgtcgcggcggcgctg
gtctccgatggcgtgcgcgccggagaccgggtcgcgatcctcgccggcaacacaccgctg
tggccgatcgtcgacgtcggcgcgctgctcgccggcacgatcgtcgtcgggctgttcccg
acgtgcaccgcggcgcaggccgatgcgctgctcggcgactgtggcgcgcgcgtgcttctc
gtcgacggcgccgcgcagctcgcgaaggtgtcgccgagcgacggacgccggatcgtgagc
gcggcgacgtgggacgagtggctcgacggcggccggcgcgcgctggccgacgaggcggtg
gcggcggagatcgcgcgccgtgcgcgcgccgcggcgcccgacgacgtcgcggggctgatc
tacacgtccggctcgacgggggagccgaagggcgcctgcgtgtcgcacgagtacctgctc
gcgtcggcggagtcgatcgcggacgcgctgaagctcgtggcgggcgacagctcgctgtcc
gtgctgccgtacgcgcacgccgcggagcgggtgttcggccactacacgcggatcgtcgtg
gggatggaggcggggctcgtggccgacgcgtcgcggctgtgggaggccgcgcggacgttc
cgcccgacggtgttcggcgggctgccgcggctgtacgagcgagcgcgcgacgcgctgctc
gcggcacgcgccgcggtgcctaacgaggcgcgcctgcgctgggacgagctgctccgcgtc
ggcgtcgatcgctcgcggctgcggcgcgcgggcgccgcggtgcccgcggatctcgaacgc
gcctgggcgtcgctgcgcgacgtcgcggcagcgccgctcgcgtcgatcttcggcgaccgg
atgcggctcgcgacgtcggggggcgcgccactcgcgcccgacgtcgcggaagcgctcgac
gcgatgggcgtgacggtgctcggggcgtacgggcagaccgagcacctgtgcgtcgcgttc
catcgtccggacgactacgacttcgacagcgtcggccgtccgatgctcggcacggagctc
cgcatcgcggccgacggcgagctgttgatcggccgcggcgcgctgacgttcgcgggctac
tggggacgacccgaggcgacgcgcgacgcgttcacggacgacgggcgctggctgcgcacc
ggcgatctggcgcggatcgacgagcgcggacggctcgcgatcacggggcgcaagaaggag
ctgctcgcgctgtcgacgggcaagaaggtggcgccgctcccgatcgagggacggctcgcg
gagcacccgcgcgtcgcgcaggcggtggtgttcggcgacggccgcaagcacgtgggcgcg
ctgctgttcctgcgcgacggcgccgcggccgacgacgcgtcgctcgacgcgcacgtgcgc
gaagtgaacgcgacgctcgcgccgcacgagcaggtgcggcggtggcgcgcggtgccgggg
gagctccgggagagcgccggcgagctcacggcgacgctcaaggtcaagcgcgcggtcgtc
gccgcgcgacacgcggatgcggtggaggcgctgttccggtga
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