Gemmatirosa kalamazoonensis: J421_3896
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Entry
J421_3896 CDS
T03025
Name
(GenBank) Cys/Met metabolism pyridoxal-phosphate-dependent protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00260
Glycine, serine and threonine metabolism
gba00270
Cysteine and methionine metabolism
gba00450
Selenocompound metabolism
gba00670
One carbon pool by folate
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
gba01230
Biosynthesis of amino acids
Module
gba_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J421_3896
00270 Cysteine and methionine metabolism
J421_3896
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
J421_3896
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J421_3896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gba04147
]
J421_3896
Enzymes [BR:
gba01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
J421_3896
Exosome [BR:
gba04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
J421_3896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
CPPA
Motif
Other DBs
NCBI-ProteinID:
AHG91433
UniProt:
W0RPL2
LinkDB
All DBs
Position
4515518..4516687
Genome browser
AA seq
389 aa
AA seq
DB search
MTRIYDDDLSGAFGTRAIHAGQRPDPTSGAIMTPIYQTSTYVQEGLGRNKGYEYARGKNP
TREALERNVAALEGGRHGFAFSSGMGCLDSIMKLFKSGDHVVCGENVYGGTFRLFDKLLQ
NYGLRFSYVDTREPQRIADAMTPETRMVMIETPTNPLMRLTDLGAAAEIAHRGDALLVVD
NTFATPYFQRPLDFGADIVWHSATKYLNGHSDMVGGMAVLNDDDLATRLQFILNAAGAVP
GPFDAWLVLRGTKTLHLRMQRHDENGRRVAQWLVERLGDERVIYPGLPTHPQHELACRQM
RGFGGMISVELGTREKAAHVLERVRVFSLAESLGGVESLISNPALMTHASVPIERRGDLG
LSEGLIRLSCGVEDVNDLLSDLEQAFEGL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggatctacgacgacgacctttcgggcgcgttcggcacgcgcgcgatccacgcc
ggccagcgcccggatccgacgagcggcgcgatcatgacgccgatctatcagacgtcgacg
tacgtccaggaagggctcgggcggaacaagggctacgagtacgcgcgcggcaagaacccg
acgcgggaggccctcgagcgcaacgtagcggcgctcgagggcggccgccacggcttcgcg
ttctcgagcgggatggggtgcctggactccatcatgaagctgttcaagagcggcgatcac
gtcgtgtgcggcgagaacgtctacggcggcaccttccgcctcttcgacaagctgctgcag
aactacggcctgcgcttctcgtacgtggacacgcgcgagccgcagcgcatcgccgatgcc
atgacgcccgagacgcgcatggtcatgatcgagacgccgacgaatccgctcatgcggctc
acggacctcggcgcggcggccgagatcgcccaccgcggcgacgcgctgctcgtcgtcgac
aacacgttcgccacgccgtacttccagcggccgctcgacttcggcgccgacatcgtctgg
cactccgccacgaagtacctgaacggccacagcgacatggtcggcggcatggcggtgctg
aacgacgacgacctcgcgacgcgcctccagttcatcctgaacgccgccggcgccgtcccc
ggcccgttcgacgcgtggctcgtgctgcgcggcacgaagacgctgcacctgcgcatgcag
cgccacgacgagaacggccgccgcgtcgcgcagtggctcgtcgagcggctcggtgacgaa
cgcgtcatatacccgggcctcccgacgcacccgcagcacgagctcgcgtgccgccagatg
cgtggcttcggcggcatgatctcggtggagttaggcacccgcgagaaggccgcgcacgtg
ctcgagcgggtccgcgtcttctcgctcgccgagtcgttgggcggcgtcgagagcctcatc
tcgaatccggcgctcatgacgcacgcgtccgtccccatcgagcgccgcggagacctcgga
ctgagcgagggcctcattcgcctgagctgcggggtcgaggacgtgaacgacctgctgtcg
gatctcgagcaggcgttcgaggggctctga
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