Gemmatirosa kalamazoonensis: J421_4127
Help
Entry
J421_4127 CDS
T03025
Name
(GenBank) alpha amylase catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00500
Starch and sucrose metabolism
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
J421_4127
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
J421_4127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AHG91664
UniProt:
W0RKQ4
LinkDB
All DBs
Position
complement(4796355..4797938)
Genome browser
AA seq
527 aa
AA seq
DB search
MSRGRPTWAAAALLVAVACGGGDGIPAPTGGEAPAVRPALATTYRPSGHAAAGDVFVHLF
EWRWSDVASECEAVLGPAGFRAVQVSPPQEHSITPARDWSERYQPVSYSIDRSRSGTRDE
FVAMVSRCRAAGVDVYVDAVINHMTNFPSPGVGSAGTAYTKYSYPGLYGPSDFHAPCTVT
DYRDAANVQDCELLSLPDLNTGLASVRQQIAGYLVSLSRLGVAGFRIDAAKHIQQVELDG
ILSIVDSTAVAEARPIPYWFLEVSGGAGEALSPRDYFGEAYRSGGAADITEFTFVGVGNK
FRGVNGEHVSQLDPNGAPGGQFSATAWGLMPADKAVVFLQNHDTQHDCGIGYRDAQVFRL
ANVWMLAQPYGYPSVLSSYAFVCPAGNAAGPPSDADGWTLPVRCASSLETATLGQWVCEH
RDPYIRNMVRFRRTVAGTDVTDWWSDGANAIAFSRGDRGFVAINRGAATLAATVRTSVAP
GAYCDLLTGGRSAAGCAGAVVTVAPDGSIALALPPNGAVAIDVTTRR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggccgccccacgtgggcggccgccgcgctcctggtcgcggtggcgtgcggc
ggcggcgacggcatccccgcgccgaccggcggcgaggcgcccgccgtccgcccggcgctc
gcgacgacgtaccggccgagcgggcacgcggccgccggcgacgtgttcgtgcacctgttc
gagtggcggtggagcgacgtcgcgtcggagtgcgaggccgttctgggccccgccggcttc
cgcgccgtgcaggtgtcgcccccacaggagcacagcatcaccccggcgcgcgactggagc
gagcgctatcagccggtgagctactcgatcgaccgcagccgctcgggcacgcgcgacgag
ttcgtggccatggtgagccgctgccgcgcggcgggcgtggacgtctacgtcgacgcggtc
atcaatcacatgaccaacttcccgagtcccggcgtcggcagcgcgggcaccgcgtacacg
aagtacagctatccggggctctacggcccgagcgactttcacgcgccgtgcacggtgacc
gactaccgcgacgcggcgaacgtgcaggactgcgagctgctctcgctccccgacctgaac
acgggcctggcgtccgttaggcagcagatcgccggctatctcgtgtcgctctcgcgcctc
ggcgtcgccggcttccgcatcgatgcggcgaagcacatccagcaggtggagctcgacggc
atcctgtcgatcgtcgattccaccgcggtcgccgaggcgcgcccgatcccgtactggttt
ctcgaggtctcgggcggggcgggggaggcgctctcgccacgcgactacttcggcgaggcg
tatcgctccggcggcgccgcggacatcaccgagttcacgttcgtcggcgtcggcaacaag
ttccgcggcgtgaacggcgagcacgtgtcgcagctcgacccgaacggggccccgggtggc
cagttctccgcgaccgcgtggggcctcatgccggcggacaaggccgtggtgttcctgcag
aaccacgacacgcagcacgactgcggcatcggatatcgcgacgcgcaggtcttccggctc
gcgaacgtgtggatgctcgcgcagccgtacgggtatccgtcggtgctctcgagctacgcg
ttcgtctgcccggccgggaacgccgccggcccgccctccgacgccgacgggtggacgctg
cccgtgcgctgcgcgtcgagcctcgagacggcgacgctcggccagtgggtgtgcgagcac
cgtgacccgtacatccgcaacatggtccgcttccgtcgcaccgtcgccggcaccgacgtc
accgactggtggagcgacggcgcgaacgccatcgcgttctcgcgcggcgaccgcggattc
gtggcgatcaaccgcggcgccgcgacgctcgccgcgacggtacgcaccagcgtcgcgccg
ggcgcgtactgcgacctgctcaccggcgggcgctcggccgccgggtgcgcgggcgcggtc
gtgacggtcgcgccggacggatcgatcgcgctcgcgctgccgcctaacggcgcggtggcg
atcgacgtgacgacgcgccgttga
DBGET
integrated database retrieval system
