Gemmatirosa kalamazoonensis: J421_4130
Help
Entry
J421_4130 CDS
T03025
Name
(GenBank) TonB-dependent outer membrane protein, SusC/RagA
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_4130
Transporters [BR:
gba02000
]
Other transporters
Pores ion channels [TC:
1
]
J421_4130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Fapy_DNA_glyco_C
phage_tail_N
DUF685
Motif
Other DBs
NCBI-ProteinID:
AHG91667
UniProt:
W0RMH3
LinkDB
All DBs
Position
complement(4801227..4804190)
Genome browser
AA seq
987 aa
AA seq
DB search
MMSRTAALLAIGTLALGSPALAQQGRISGTVTSADDARPVAAVQVVVVGTTNGTVTREDG
RYTITARPGTYRVRAIRIGYAPDSATVTVTDGGDATANFTLHPTATILSTVVSIGYGTQE
KRDRTGAVEVVDSSQFNKGRIISPDQLIKAKVPGVQVVDNNEPGGGVAVRIRGGTSINAS
NDPLYVVDGVPLQVGGGVSAGRNPLNFLNPNDIEGISVLKDASATAIYGSRGANGVVIIT
TKQGKRGTQVDYASSVSSSVVTGQPDMLDAAQIRAAVQQYAPENLNQLGNASTNWRDLIE
RNAGGQEHTLGISGMREDMRYRVSLGYLDQGGVLIGTDTRRASLGVNYADQLFAKRLEVT
ASLKGSRSDDKFTPGGVLSGATLFSPTLAPYTANGGFTQYANILAAANPLSELAYISDAG
RTYRSIGNVEARYKTPWVPGLSATVRGGYDVATAERTTFTSSLQHGQVGADNPGTFYRNS
PEQTGLVLETFGNYVHDVGAKSTVDLTAGYTYEQANGDYPSFTARGLASNLLGPNGVPAA
KQVDQFLTQDESKLVSGFARANLSLADRYLLTLSVRRDGSSRFGPANQWGWFPSAALAWR
VINEPWFQNHAGPFSDLKLRVSYGVNGNQAFGNYLQYSTYTYANNLAQVQFGNTFVTPIR
PSAVDPDIKWEQTASTNFGVDYGFLDNRFTGSVEVYNKKTTNLIFNVPVAAGTNLSNFVT
TNIGSMQNRGVEFGLTAQVLEGGSRGLSYTASFNAATNTNKLLRITGAGSDQIAVGGIAG
GVGTTIQVLQPGVPVNSFFVYRHRTDASGNPVVGDKPDSALYVDQNGDKTINQADRVAYK
SPQPKWILGHTSNLAYRRVDLNFTLRSYLGNYVYNNVASNLGHYDALKGIWPSNLQASVL
KNGFVKMQSFSDLYVEDASFLRLDNVTLGYTFKQPRGFRALRLYGSVQNVFTLTGYSGLD
PAAGLNGIDNNIYPLSRTFSAGINVGF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcgcacagcagcactgctggcgatcggaaccctcgccctgggatccccggcg
ctcgcgcagcaggggcgcatctcgggcacggtgacctcggccgacgacgcccgacccgtc
gccgccgtgcaggtcgtcgtggtcggcacgacgaacggcaccgtgacccgcgaggacggc
cggtacacgatcaccgcgcgccccggcacgtatcgtgtccgcgccatccgcatcggctac
gcgcccgactcggccaccgtcaccgtgaccgacggcggcgacgcgaccgcgaacttcacg
ctgcatccgacggcgaccatcctctccaccgtcgtcagcatcggctacggcacgcaggag
aagcgcgaccgcaccggcgcggtcgaggtggtcgactcgtcgcagttcaacaagggacgc
atcatcagcccggaccagctcatcaaggcgaaggtgccgggcgtgcaggtcgtcgacaac
aacgagccgggcggcggcgtcgcggtgcggatccggggcggcacgtcgatcaacgcgagc
aacgacccgctctacgtcgtcgacggcgtgccgctccaggtgggcggcggcgtgtcggcc
gggcgcaacccgctgaacttcctgaacccgaacgacatcgaggggatctcggtgctgaag
gacgcgtcggccaccgcgatctacggatcgcgcggcgcgaacggcgtcgtcatcatcacc
acgaagcagggcaagcgcggcacgcaggtggactacgcgagctccgtgtcgagctccgtc
gtcaccgggcagcccgacatgctcgatgcggcgcagatccgcgcggcggtgcagcagtac
gcgcccgagaacctgaaccagctcggcaacgcgtcgacgaactggcgcgacctcatcgag
cgcaacgccggtggccaggagcacacgctcggcatctcgggcatgcgcgaggacatgcgc
taccgcgtgtcgctcggctacctcgaccaggggggcgtgctgatcggcaccgacacgcgc
cgcgcgtcgctcggcgtgaactacgcggaccagctgttcgcgaagcgcctcgaggtgacg
gcgagcctgaagggcagccggtcggacgacaagttcacgccgggtggggtgctgagcggc
gcgacgctgttctcgcccacgctcgcgccgtacaccgcgaacggcggtttcacgcagtac
gcgaacatcctcgccgccgccaacccgctctccgagctcgcctacatctccgacgccggg
cgcacctaccgcagcatcggcaacgtcgaggcgcgctacaagacgccgtgggtgccgggg
ctctcggccacggtgcgcggcggctacgacgtggcgaccgcggagcgcacgacgttcacg
tcgtcgctgcagcacgggcaggtcggcgccgacaacccgggcacgttctaccgcaacagc
ccggagcagacggggctcgtgctcgagacgttcggcaactacgtgcacgacgtcggcgcg
aagagcacggtcgacctcacggccgggtacacgtacgagcaggcgaacggcgactatccg
tcgttcaccgcgcgcgggctcgcgtcgaacctgctcgggccgaacggcgtgccggccgcg
aagcaggtcgaccagttcctcacccaggacgagagcaagctcgtctccggcttcgcgcgc
gcgaacctctcgctcgccgaccgctacctgctgacgctgagcgtgcgccgcgacggctcg
tcgcgcttcggcccggcgaaccagtggggatggttcccgtcggccgcgctcgcgtggcgc
gtcatcaacgagccgtggttccagaaccacgccgggccgttctccgacctcaagctgcgc
gtctcgtacggcgtgaacggcaaccaggccttcggcaactacctgcagtactcgacgtac
acgtacgcgaacaacctcgcgcaggtgcagttcggcaacacgttcgtgacgcccatccgg
ccgtcggcggtggaccccgacatcaagtgggagcagaccgcgtcgacgaacttcggcgtc
gactacggattcctcgacaaccgcttcaccggctcggtcgaggtctacaacaagaagacg
acgaacctgatcttcaacgtgccggtcgcggcgggcacgaacctgtcgaacttcgtcacg
acgaacatcggctcgatgcagaaccgcggcgtcgagttcgggctcacggcgcaggtgctc
gagggcggctcgcgcgggctgagctacacggcgagcttcaacgcggcgacgaacacgaac
aagctgctgcgcatcaccggcgccgggagcgaccagatcgcggtcggcggcatcgcgggc
ggcgtcgggacgacgatccaggtgctgcagccgggcgtgccggtgaactcgttcttcgtc
taccgccaccgcaccgacgcgagcggcaacccggtcgtcggcgacaagccggacagcgcg
ctctacgtcgaccagaacggcgacaagacgatcaaccaggcggaccgcgtcgcctacaag
agcccgcagccgaagtggatcctcggccacacgtcgaacctcgcttaccgccgcgtcgac
ctgaacttcacgctgcggtcgtatctcgggaactacgtgtacaacaacgtcgcgtcgaac
ctcgggcactacgacgcgctgaaggggatctggccgagcaacctgcaggcgtcggtgctg
aagaacgggttcgtgaagatgcagtcgttctccgacctgtacgtcgaggacgcgtcgttc
ctgcggctggacaacgtgacgctcggctacacgttcaagcagccgcgcggcttccgcgcg
ctgcggctgtacggctcggtgcagaacgtcttcacgctcaccggctacagcgggctcgat
cccgcggccgggctgaacggcatcgacaacaacatctacccgctgtcgcgcacgttctcg
gcgggcatcaacgtcggcttctga
DBGET
integrated database retrieval system
