Gemmatirosa kalamazoonensis: J421_4158
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Entry
J421_4158 CDS
T03025
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gba02044
]
J421_4158
02035 Bacterial motility proteins [BR:
gba02035
]
J421_4158
Secretion system [BR:
gba02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
J421_4158
Bacterial motility proteins [BR:
gba02035
]
Pilus system
Pilus assembly proteins
J421_4158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_7
AAA_22
AAA_11
AAA_14
AAA_29
nSTAND3
DUF4388
AAA_23
AAA_30
AAA
AAA_19
cobW
ABC_tran
DEAD
FtsK_SpoIIIE
Pox_A32
Herpes_Helicase
Rad17
Motif
Other DBs
NCBI-ProteinID:
AHG91695
UniProt:
W0RN20
LinkDB
All DBs
Position
complement(4841973..4843802)
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AA seq
609 aa
AA seq
DB search
MAAPLALVAERERLGELLVREGLINREQLARALEEQRTSGMRLGYCFVKLGLLQETTLTK
MLARQYRMPAVDLSRFEVDPRILKLVPSELASRHLVLPLKREGRTLTVAIADPANAGVLD
DLKFVTRYDIFPVVAGEYTLRQLVEKHYENGDVQMQSLLAEIAADDSDVEVIENTEDDGA
PLATQVDEAPVVRLVNAILMEAVKRGASDIHVECFEHEIRVRYRVDGALQEIMKPPMKLK
AALISRLKIMSALNIAERRVPQDGRLRLKIGKKVIDFRVSTLPTLFGEKIVLRILDKGNL
TLDLETFGIEARAEHELMEAISNPYGMVLVTGPTGSGKTTTLYSCLSKINTGDTNIMTAE
DPVEYNLFGINQVQVRPEVGLTFASALKAFLRQDPNVIMLGEIRDLETGGIAIKAALTGH
MVLSTLHTNSAPETVTRLLDMGLEPFNVASALNLVLAQRLVRRVCSKCRERYVPDAAEIA
AAKVTPDTTLRDLRFTAEAIEAAKAKAVKEAAPLIANVTVDSKITELAYFRGTGCDACAG
TGLKGRQGVYEVMTMTPRIRKTILTGGGDAALLRETAIEEGMLTLRMDGWLKVLRGITTM
EQVIRETSA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacctctcgccctcgtcgcggaacgcgagcgtctcggtgagctcctcgttcgc
gaggggctgatcaaccgggagcagctcgcgcgcgcgctcgaggagcagcgcacgagcggc
atgcggctcggctactgcttcgtgaagctcgggctcctgcaggagacgacgctcacgaag
atgctcgcgcgtcagtaccgcatgccggcggtcgatctgtcgcgcttcgaggtcgatccg
cgcatcctgaagctcgtgccgtccgagctcgcgtcgcggcacctcgtgctgccgctcaag
cgcgaggggcgcacgctcaccgtcgccatcgccgacccggcgaacgccggtgtcctcgac
gacctcaagttcgtcacgcgctacgacatcttccccgtcgtcgcgggcgagtacacgctg
cggcagctcgtcgagaagcactacgagaacggcgacgtgcagatgcagtcgctgctcgcc
gagatcgcggccgacgacagcgacgtcgaggtcatcgagaacaccgaggacgacggcgcg
ccgctcgccacccaggtggacgaggcgcccgtcgtgcgtctcgtcaacgccatcctgatg
gaggcggtgaagcgcggcgcgagcgacatccacgtcgagtgcttcgagcacgagatccgc
gtgcgctaccgcgtggacggcgcgctgcaggagatcatgaagccgccgatgaagctgaag
gcggcgctcatctcgcgcctcaagatcatgtcggcgctcaacatcgccgagcggcgcgtg
ccgcaggacgggcgactgcgcctcaagatcggcaagaaggtcatcgacttccgcgtcagc
acgctgccgacgctgttcggcgagaagatcgtgctccgtatcctcgacaaggggaacctc
acgctcgacctcgagacgttcggcatcgaggcgcgcgccgagcacgagctgatggaggcg
atctcgaacccgtacggcatggtgctcgtgacgggtccgacgggctccggtaagacgacc
acgctctactcgtgtctgtcgaagatcaacaccggcgacacgaacatcatgacggccgag
gacccggtcgagtacaacctgttcggcatcaaccaggtgcaggtgcggcccgaggtgggg
ctcacgttcgcgtcggcgctgaaggccttcctgcgtcaggacccgaacgtcatcatgctc
ggtgagatccgtgacctggagacgggcggcatcgcgatcaaggccgcgctcacgggtcac
atggtgctctcgacgctgcacacgaactccgcgccggagacggtgacgcgtctgctggac
atggggctggagccgttcaacgtggcgagcgcgctgaacctcgtgctcgcgcagcgactc
gtgcgccgcgtgtgctcgaagtgccgcgagcgctacgtgcccgacgcggcggagatcgcg
gcggcgaaggtgacgcccgacacgacgctgcgcgacctgcggttcacggccgaggcgatc
gaggcggcgaaggcgaaggcggtgaaggaggccgcgccgctcatcgcgaacgtcacggtc
gactccaagatcacggagctggcgtacttccgcggcacgggctgcgacgcgtgcgccggc
acgggcctgaagggacggcagggcgtgtacgaggtgatgacgatgacgccccgcatccgc
aagaccatcctcaccggcggcggcgacgccgcgctgctccgcgagacggcgatcgaggag
gggatgttgacgctgcgcatggacggctggctgaaggtgctgcgcggcatcacgacgatg
gagcaagtgattcgcgagacgagcgcctaa
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