Gemmatirosa kalamazoonensis: J421_4174
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Entry
J421_4174 CDS
T03025
Name
(GenBank) ABC transporter transmembrane region
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J421_4174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_4174
Enzymes [BR:
gba01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
J421_4174
Transporters [BR:
gba02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J421_4174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
AAA_25
AAA_30
APS_kinase
AAA_29
NB-ARC
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHG91711
UniProt:
W0RLU4
LinkDB
All DBs
Position
4869534..4871324
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AA seq
596 aa
AA seq
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MTAAPADARARKRRLASPKPLGKLLPLLRPHAGRLAVAAVCLVLAAGAGLVFPKIVGWLL
DSAFMLRDRGRLDRIALALLAVFAVQGVLNFVQVYLLSATAERVTARLREELFAHLVQLS
PGFFTERRTGELTSRLSADLALLQSLLNTWISELARQLLFLVGGVVLLTFTDPHLTLTTL
AVAPVIVAAAIVFGRMLRRASTGVQDRVAEATAMADEAFSQIRTVQSFVRESHEVRRYGA
LLGEVVTAAVARARMRATFFGVVGFVAFAGVTAVLWEGGQRVLAGTLTAGALVQFLFYAF
FIAAAVGSLASLFGHFQEAIGAAGRVFELLATAPVVAEPAAPLPLGRVRGAVALDGVTFR
YGPTLPDVLHDVSLHAAPGEVVALVGRSGAGKTTIASLLPRFWDVPAGRVSLDGEDVRTL
SLTELRGAIGVVPQEPALFSGTIRENIAYARPDASLDDVIAAARAAHAHEFVERLPNGYD
TPVGERGVKLSGGQRQRVAIARVFLKDPAVVVLDEATSSLDSESERLVEAALEELLQGRT
TIIIAHRLSTVRRADRVVVLDHGRVVESGSHAELLAQDGLYAKLYQGQFREDEVPV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcacctgccgacgcccgcgcccgcaagcggcgcctcgcgtcgcccaagccg
ttaggcaagctccttcccctgcttcgaccccacgccggcagactcgccgtcgccgccgtg
tgcctcgtgctcgccgccggcgcggggctcgtcttcccgaagatcgtcggctggctgctc
gactcggcgttcatgctgcgcgaccgcgggcgcctcgaccgcatcgcgctcgcgctgctc
gccgtcttcgccgtgcagggcgtgctcaacttcgtgcaggtctacctgctgagcgcgacg
gccgagcgcgtgacggcgcggctgcgcgaggagctgttcgcgcacctcgtgcagctctcg
ccgggcttcttcaccgagcggcgcacgggcgagctgacgagccggctctccgccgacctg
gcgctgctccagtcgctgctcaacacctggatctcggagctcgcgcggcagctgctgttc
ctcgtcggcggcgtggtgctgctcacgttcaccgacccgcacctcacgctcacgacgctc
gccgtcgcgccggtgatcgtcgccgcggcgatcgtgttcggccgcatgctgcgccgggcg
agcaccggcgtgcaggaccgcgtggccgaagcgacggcgatggccgacgaggcgttctcg
cagatccgcacggtgcagagcttcgtgcgcgagtcgcacgaggtccggcgctacggcgcg
ctgctcggcgaggtcgtgacggcggccgtggcgcgggcgcgcatgcgggcgacgttcttc
ggcgtcgtcggcttcgtcgcgttcgcgggcgtgacggcggtgctgtgggagggcggtcag
cgcgtgctcgccggcacgctcacggcgggcgcgctcgtgcagttcctgttctacgcgttc
ttcatcgccgccgcggtcgggtcgctcgcgtcgctgttcgggcacttccaggaggcgatc
ggcgccgcggggcgcgtgttcgagctgctcgccaccgcgccggtcgtcgccgagccggcg
gcgccgctgccgttggggagagtgcgcggcgccgtcgcgctcgacggggtgacgttccgc
tacggccccacgctccctgacgtgctgcacgacgtgtcgctgcacgcggcgcccggtgag
gtcgtcgcgctcgtcggccgctcgggcgccggcaagacgacgatcgcgtcgctgctgccg
cgcttctgggacgtgccggcggggcgcgtgtcgctcgacggtgaggacgtgcgcacgctg
tcgctgaccgagctgcgcggcgcgatcggcgtcgtgccgcaggagcccgcgctgttcagc
ggcacgatccgcgagaacatcgcgtacgcccgccccgacgcgtcgctcgacgacgtgatc
gcggccgcgcgcgccgcgcatgcgcacgagttcgtggagcggttgccgaacggctacgac
acgccggtcggcgagcgcggcgtgaagctctccggcggccagcgccagcgcgtcgccatc
gcgcgcgtcttcctcaaggatcccgccgtcgtcgtgctcgacgaggcgacgtccagcctc
gactcggagagcgagcggctcgtcgaggccgcgctcgaggagctgctgcaggggcgcacg
acgatcatcatcgcgcatcgcctgagcaccgtgcgccgcgccgaccgcgtcgtggtgctc
gaccacggccgcgtcgtggagtcgggcagccacgccgagctgctcgcgcaggatggactg
tacgcgaagctgtaccagggacagttccgggaggacgaggtccccgtctga
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