Gemmatirosa kalamazoonensis: J421_4786
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Entry
J421_4786 CDS
T03025
Name
(GenBank) hypothetical protein
Organism
gba
Gemmatirosa kalamazoonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
PSII_BNR
DUF6242_C
CARDB
Motif
Other DBs
NCBI-ProteinID:
AHG92321
UniProt:
W0RNK4
LinkDB
All DBs
Position
p1:226004..229438
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AA seq
1144 aa
AA seq
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MKAPVSTPPTGRVAPRGSARPRGKVPGGKALARLNMMLAMRGIAPEPKPPEPPALPDVPT
PEPAPGAVPEPASAAAAIVAGYHAVRHQLAAAAAAPLGAPPLGASRSWQPLGPYFMPHGQ
SYGTGIGSRPPVAGRVSAIAVDPRDDLHVLCGSAGGGVWETRDGGLTWTPRTDDQPSLAI
GALAFDPSDPRRVYCGTGEGNSAESPNRNVRAAGLLVSDDAGATWAVLPGATFVGISFYD
LVVDPTNGDHLLAATTSGLWESTDRGATWARRRAGLVWSLSMHPPVPTNPAASREVLAGC
ADGVWRSVDGGRTWAAVAMPGTPAGFQANRIAVDHAPGNGSVAYAYAAGPPNVVDTLATE
ESGQTVRMPKPYLWRRETFGGAFASVRPPPDIQTAQAWYDWFLAVAPNNPDAVYLGAINA
HRGERQDDGAWVWTNISAKRPTGDSIHPDQHAIAFGPTDPNVVYIGSDGGLFRSPDAGQQ
WKSLNKGMCITEIEFLAQHPEYDAWLLAGTQDNGTIRYEGQQVWYHVADGDGGDCAVDAD
EPYVCYHSYYGPYVERSDGGGAWNDWKAATPKALNDEDALFYPPLDVNGKLVVRGATQVW
VSRDGGAHWRAVPIGAEGFPSAVTAATADRIYVGTDGGEAFRLDRAGASWHVAALTTPAQ
GYMTEILVDPVTPTVLWCAVNSGGRGTVYRSADGGATWTAVRAGLPDVAVNALEIDPTAP
DTLFAATDVGVSRTDDGGATWTSFGRGLPNVLVKDVLLHPRTRLLRAGTQARGVWEIPVD
ATPTPDVQVYVRDHAADTGRVLPSVVDVPNPFAKGTNLFWWQSPDVKIDASPFRTSRLDD
LQFDVYSDDRSKVDEQGVQFAAGLLDERPARGQSVRVYVQVHNRGRLAAQQVAVRVFFVG
GSATLPGLPNGFWTAFPSNVVPAAAPWQPVAPHRVIDRIESGRSAVVGFDWSVPMTIGSA
VALLAIVSAGNDPITAGSLDVGDLVRNSRQCALRNLAVINPPAVVGPKSHALVLDLWPSG
AASLTLDAAARALVRGVVMSKALGAAAKKAGWKSLATTKLDAAHLTQATDARPALKQQLD
LRRAYVPTAKAFTLDLAALAMPGPEPVIVLLKRGARRGAGSLVARMPGGAPSGGLTIVNL
AGES
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctccggtctcgacaccccctaccgggcgcgtcgcgccccgcggctcggcgcgt
ccccgcggcaaggtccccggcggcaaggcgctcgcgcggctcaacatgatgctcgccatg
cgcggcatcgcgcccgagccgaagccccccgagccgcccgcgctccccgatgtgccgacc
cccgagccggcccccggcgccgtgcccgagccggcgtccgccgcggcggcgatcgtcgcc
ggctatcacgcggtgcggcatcagctcgccgccgccgcggccgcgccgttaggcgccccg
ccgttgggcgcgagccgcagctggcagccgctcgggccgtacttcatgccgcacggccag
agctacggcaccggcatcggcagccgtccgccggttgccggacgcgtctcggccatcgcc
gtcgatccgcgcgacgacctgcacgtgctgtgcggctcggcgggcggcggcgtgtgggag
acgcgcgacggcggtctcacgtggacgccgcgcaccgacgatcagccgtcgctcgccatc
ggcgcgctcgcgttcgatccgtcggatccgcgccgcgtgtactgcggcaccggcgagggg
aacagcgccgagtcgccgaaccgcaacgtgcgcgcggccgggctgctcgtgtccgacgac
gccggcgcgacgtgggccgtgctccccggcgcgacgttcgtcggcatcagcttctacgac
ctcgtcgtcgatccgacgaacggcgaccacctgctcgcggcgacgacgagcggcctgtgg
gagtcgaccgaccgcggcgcgacgtgggcgcggcgccgcgcggggctcgtctggagcctg
tcgatgcatccgcccgtaccgacgaaccccgcggcgtcgcgcgaggtgctcgccgggtgt
gccgacggcgtgtggcgctccgtcgatggcggccgcacgtgggccgcggtcgcgatgccc
ggcacgccggcgggcttccaggcgaaccgcatcgcggtcgaccacgcgccgggcaacggc
agcgtcgcgtacgcgtacgccgccggaccgcctaacgtcgtcgacaccctcgcgaccgag
gagtcgggccagacggtgcgcatgcccaagccgtacctctggcggcgcgagacgttcggc
ggcgcgttcgcgagcgttaggccgcccccggacatccagacggcgcaggcgtggtacgac
tggttcctcgccgtcgcgccgaacaaccccgacgcggtgtacctcggcgcgatcaacgcg
caccgcggcgagcggcaggacgacggcgcgtgggtgtggacgaacatctcggcgaagcgg
ccgaccggcgacagcatccaccccgaccagcacgcgatcgcgttcgggcctaccgacccg
aacgtcgtctacatcggcagcgacggtgggttgttccgctcccccgacgccgggcagcaa
tggaagtcgctgaacaaggggatgtgcatcaccgagatcgagttcctcgcgcagcacccc
gagtacgacgcgtggctgctcgccggcacgcaggacaacggcaccatccgctacgaaggg
cagcaggtgtggtaccacgtcgccgacggcgacggcggcgactgcgccgtggacgccgac
gagccgtacgtctgctatcactcgtactacggcccgtacgtcgagcgctccgacggcggc
ggcgcgtggaacgactggaaggcggcgacgccgaaggcgctgaacgacgaggacgcgctg
ttctatccgccgctcgacgtgaacggcaagctcgtcgtacgcggcgcgacacaggtgtgg
gtctcgcgcgacggcggcgcgcactggcgcgcggtgcccatcggcgcggaggggttcccg
agcgcggtgaccgcggcgacggcggaccgcatctacgtcggcaccgacggcggcgaggcg
ttccggctcgatcgcgcgggcgcgtcgtggcacgtcgccgcgctcaccacgcccgcgcag
ggctacatgacggagatcctcgtcgaccccgtcacgccgacggtgctgtggtgcgccgtg
aacagcggcggccgcggcaccgtgtatcgctccgccgacggtggcgcgacgtggaccgcg
gtgcgcgccggcctgcccgacgtcgcggtgaacgcgctcgagatcgaccccacggcgccg
gacacgctgttcgcggccaccgacgtcggcgtgtcgcgcaccgacgacggcggcgccacg
tggacgtcgttcggccgcgggctgcccaacgtgctcgtgaaggacgtgctgctgcacccg
cgcacgcggctgctccgcgccggcacgcaggcgcgcggcgtgtgggagatcccggtcgac
gcgacgccgacgcccgacgtgcaggtgtacgtgcgcgaccacgccgccgacaccgggcgc
gtactcccttcggtcgtcgacgtgccgaacccgttcgcgaaggggacgaacctgttctgg
tggcagtcgccggacgtgaagatcgacgcctcgccgttccgcacgtcgcggctcgacgac
ctgcagttcgacgtctactccgacgaccggagcaaggtcgacgagcagggcgtgcagttc
gccgccgggctgctcgacgagcggccggcgcgcgggcagtcggtgcgcgtgtacgtgcag
gtgcacaaccgcggccggctcgccgcgcagcaggtggcggtgcgcgtgttcttcgtcggc
ggcagcgcgacgctccccgggctgccgaacggattctggacggcgttcccgagcaacgtc
gtgccggcggccgcgccgtggcagccggtcgcgccgcaccgcgtgatcgaccgcatcgag
tcggggcgcagcgccgtcgtcggcttcgactggtcggtgccgatgacgatcggcagcgcc
gtcgcgctgctcgcgatcgtctccgcggggaacgatccgatcaccgccggctcgctcgac
gtcggggacctcgtgcgcaactcgcggcagtgcgcgctgcgcaacctcgccgtcatcaac
ccgccggcggtcgtcggcccgaagtcgcacgcgctcgtgctcgacctgtggccgagcggc
gcagcgtcgctcacgctcgacgcggcggcgcgcgcgctcgtgcgcggcgtggtgatgagc
aaggcactcggtgccgcggcgaagaaggcgggatggaagtcgctcgcgacgacgaagctc
gacgccgcgcatctcacgcaggccaccgacgcgcggccggcgctgaagcagcagctcgat
ctgcggcgcgcgtacgtgccgacggcgaaggcgttcacgctcgatctcgcggcactggcg
atgccggggcccgagccggtgatcgtgctgctgaagcgcggggcacgccggggcgcgggg
tcgctcgtcgcgcggatgccgggcggcgcgccgtccggcggcctcacgatcgtgaacctc
gccggggagagctga
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