Gemmatirosa kalamazoonensis: J421_4861
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Entry
J421_4861 CDS
T03025
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00040
Pentose and glucuronate interconversions
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J421_4861
Enzymes [BR:
gba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
J421_4861
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GFIT
Motif
Pfam:
Pectate_lyase22
Aq_1974-like
Motif
Other DBs
NCBI-ProteinID:
AHG92396
UniProt:
W0RNT1
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All DBs
Position
p1:complement(321636..322889)
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AA seq
417 aa
AA seq
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MRLRVVAPLLAALIASRAAAQEPRTDWVDPATGHRVIRLSAEPGSQTLYFHDNAYSPEGD
RFVFTGPAGIMTVDLTALGTAPPRAELAVPRPAGGAYVARRSREIYFTRGGEVLAYHMDT
KATRRVPHATRTVINADESVAATAVAAEDPSGHTPRPAYREPRPQLERMFPGKRLDELTP
EQQYAVTKEDGLARRALNPDGMAFVFTDLKTGASRTTGYQYAWLNHLQFSPTDPALLLYC
HEGTWHEVDRIWTIRTDGSEMTLRHRRTMDMEIAGHEFWSHDGRTIWFDLQTPRSGVFWI
AGVDVATGRERRYRVDRDAWSVHYNVSRDDSLFMGDGGDETQVAFAKDGRWINLFRVQPD
GTLRREKLVDMSRHNYVTGRGGVEPNGSITPDKKWVIFTGNFDGARHVYAVEIARRR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctccgcgtcgtcgcgccgctgctcgccgcgctgatcgcctcgcgcgcggcggcg
caggagccgcgcaccgactgggtggatccggctacgggccaccgcgtcatccgcctgtcc
gcggagccggggagtcagacgctctacttccacgacaacgcgtactcgccggagggggac
cgcttcgtcttcacgggtcccgccggcatcatgacggtggatctgacggcgttaggcacc
gcgccgccgcgcgccgagctggcggtgccgcgcccggcgggcggcgcgtacgtcgcccgg
cggtcgcgcgagatctacttcacccgcggcggcgaggtgctcgcgtaccacatggacacg
aaggcgacgcgccgcgtgccgcacgcgacgcgcaccgtgatcaacgccgacgagagcgtc
gccgccacggccgtcgcggccgaggatccttccgggcacacgccgcggccggcgtaccgc
gagccgcgcccgcagctcgagcgcatgttccccggcaagcggctcgacgagctgacgccg
gagcagcagtacgcggtgacgaaggaggacggcctcgcgcggcgcgcgctcaaccccgac
ggcatggcgttcgtcttcaccgacctgaagaccggcgcgtcgcgcaccaccggctaccag
tacgcgtggctcaaccacctgcagttctcgccgacggatcccgcgctgctgctctactgc
cacgagggcacgtggcacgaggtggaccgcatctggacgatccgcaccgacggatccgag
atgacgctgcgccaccggcgcacgatggacatggagatcgcgggccatgagttctggagc
cacgatggccgcacgatctggttcgatctgcagacgccgcgcagcggggtcttctggatc
gccggcgtcgacgtcgccaccggcagggagcggcgctaccgcgtcgaccgcgacgcatgg
tcggtgcactacaacgtgtcgcgcgacgactcgctgttcatgggcgacggcggcgacgag
acgcaggtggcgttcgcgaaggacggccggtggatcaacctgttccgcgtgcagcccgac
ggcacgctgcggcgcgagaagctggtcgacatgtcacggcacaactacgtgaccggccgc
ggcggcgtggagcccaacggctcgatcacgccggacaagaagtgggtgatcttcaccggc
aacttcgacggcgcgcgccacgtgtacgcggtggagatcgcgagacgccgatag
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