Gemmatirosa kalamazoonensis: J421_5053
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Entry
J421_5053 CDS
T03025
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gba01002
]
J421_5053
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
J421_5053
Peptidases and inhibitors [BR:
gba01002
]
Cysteine peptidases
Family C82
J421_5053
Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
J421_5053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AHG92588
UniProt:
W0RSM4
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All DBs
Position
p1:554362..556014
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AA seq
550 aa
AA seq
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MRTFAIALLALLLAAPARARAQPTVAAATDGPRWIDAGGRATAGAYALVALLRRADERGL
RPADYGAQSLGARLAALPGATTTEAAALDVALTRAALRFLTHLHMGRLDPHALGFHLPDS
HGELDLAPPLLALSRARSDTDAARVLASVEPPYAGYRALLAMLGRYRALAADPALHAPLL
PRGGLRRGDAFADAPTLRRLLAALGDLPNGAPAADSARYDDALAGAVRAFQRRHGLAYDG
DVGPATAAALAVPLARRVRQIELTLERWRWLPDSAAQRFVVVNIPAFRLYAFEDDPTAAH
PALRMDVIVGRAAGARRTPVFAATMREVVFRPYWDVPPSIAANELLPRIRRRPGTLDAED
LEIVRAGDDGRAARTYAPNAANLARVASGTLRLRQRPGDRNALGPVKLVFPNPYNVYLHG
TPARELFRQTRRDFSHGCIRVADPAALAAFALRGQVEWDSAAIAHAMASGPWSRRVAVAR
PIEVLTLYGTVVQGDDGLVRFYPDVYGHDAALERTLGLVPVAARVSRPSGVPAPRIGGPP
DVMPRAPGAP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgttcgcgatcgcactgctggcgctgctgctcgccgctccggcgcgcgcgcgg
gcgcagccgacggtcgcggccgcgacggacggcccgcgctggatcgacgccggcggtcgc
gcgaccgcgggggcgtacgcgctcgtcgcgctgctccgtcgcgccgacgagcgcgggctg
cggccggcggactacggcgcgcaatcgttaggcgcgcggctcgcggcgctgccgggtgcc
accacgacggaggccgccgcgctcgacgtcgcgctcacgcgcgcggcgctgcgcttcctg
acgcacctgcacatgggccggctcgacccgcacgccctcggcttccacctgcccgactcg
cacggcgagctggatctcgcgccaccgctgctcgcgttgagccgggcgcggagcgacacc
gacgcggcgcgggtgctggcgtccgtggagccgccgtatgccggctaccgcgcgctgctc
gcgatgctcggccgctaccgcgcgctcgccgccgatcccgcgctgcacgcgccgctcctg
ccgcgcggcggcctgcgccgcggcgacgcgttcgccgacgcgccgacgctccgacgcctg
ctcgccgcgctcggcgatctgcccaacggtgcgccggcggccgacagcgcgcgctacgac
gatgcgctggcgggggcggtgcgcgcgttccagcgccggcacgggctcgcgtacgacggc
gacgtcggccccgccaccgcggcggcgctggcggtgccgctcgcgcgccgcgtgcggcag
atcgagctcacgctggagcggtggcgctggctccccgactccgcggcccagcggttcgtc
gtcgtcaacatccccgcgttccgtctctacgcgttcgaggacgaccccaccgccgcgcac
ccggcgctgcgcatggacgtgatcgtgggccgcgccgccggcgcgcgccgcacgccggtg
ttcgcggcgacgatgcgcgaggtcgtgttccgcccctactgggacgtcccgccgagcatc
gcggcgaacgagctgctgccgcgcatccggcgccggcccggcaccctcgacgcggaggat
ctggagatcgtgcgggcgggcgacgacgggcgggccgcgcgcacgtatgcgcctaacgcg
gcgaacctcgcccgagtggcgtcgggcacgctccggctgcggcagcgcccaggcgatcgc
aacgcgctcggccctgtgaagctcgtcttcccgaacccgtacaacgtctacctgcacggg
acgccggcgcgggagctgttccgccagacgcgccgcgacttcagccacggctgcatccgc
gtcgccgatcccgcggcgctcgccgcgttcgcgctgcgcgggcaggtcgagtgggacagc
gcggccatcgcgcacgccatggcgagcggcccgtggtcgcggcgcgtggcggtcgcgcgt
cccatcgaggtgctcacgctctacgggaccgtcgtgcagggcgacgacgggctggtgcgc
ttctaccccgacgtctacggccacgacgcggcgttggagcgtacgctcggcctcgtgccg
gtcgcggcgcgggtctcccgaccgtcaggcgtccccgcaccgcgcatcggtggtccgccc
gatgtcatgccccgcgcgccgggcgcaccgtag
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