Gemmatirosa kalamazoonensis: J421_5176
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Entry
J421_5176 CDS
T03025
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K10560
rhamnose transport system permease protein
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J421_5176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_5176
Transporters [BR:
gba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
J421_5176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AHG92711
UniProt:
W0RPU5
LinkDB
All DBs
Position
p1:complement(686159..687130)
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AA seq
323 aa
AA seq
DB search
MIGAYKRELPPAVALALLLLVVAVAAPSFFDGGNLRDLALANAGALLVAVGMTLVILVGE
IDISVASQFAVCSVAAGVLAKAGVPVPLLAPAVIVVGAAMGAVNGALVGLLGLPSIIVTL
AMFVAWRDALRWATEGAWVQDLPADFQWLGLSPAAAQWLIVLVALGVLAVFAWGLRNLGV
GRSLYAVGSDAEAARLAGIEPPATVLGVFVVMGALVGLAATLNAVRFTSVPSNAGVGLEM
KAIAAVVVGGTAITGGRGRLGGTLLGVVLLGTIGTALTFLGINPFWEKAIQGGIILAALV
SDVAIGRLEHHVRHFGRARPAVG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcgtacaagcgggagctgccgccggccgtcgcgctcgcgctgctgctgctc
gtcgtcgcggtcgcggcgccgtcgttcttcgacgggggcaacctgcgcgacctcgcgctc
gcgaacgccggcgcgctgctcgtcgccgtcggcatgacgctcgtcatcctcgtcggcgag
atcgacatctccgtcgcgtcgcagttcgcggtgtgcagcgtggcggccggcgtgctcgcg
aaggccggcgtgccggtgccgctgctcgcaccggcggtgatcgtcgtcggcgcggcgatg
ggcgccgtgaacggggcgctcgtcgggctgctcgggctgccgtcgatcatcgtcacgctc
gccatgttcgtggcgtggcgcgacgcgctgcggtgggcgacggagggcgcgtgggtgcag
gacctgccggccgacttccagtggctcggcctgagccccgccgccgcgcaatggctcatc
gtgctcgtcgcgttgggcgtgctcgcggtgttcgcgtggggactccgcaacctcggcgtc
ggtcgctcgctctacgccgtcggctccgacgcggaggcggcgcggctcgccggcatcgag
ccgccggcgacggtgctcggcgtgttcgtcgtcatgggcgcgctcgtcggcctcgcggcg
acgctgaacgcggtgcgcttcacgtccgtgccgagcaatgccggcgtggggctcgagatg
aaggcgatcgccgccgtcgtcgtcggcggcacggcgatcaccggcgggcgcggacgcctc
ggcggcacgctgctcggcgtcgtgctgcttggcaccatcggcacggcgctcacgttcctc
ggcatcaatccgttctgggagaaggcgatccagggcggcatcatcctcgccgcgctcgtc
tcggacgtcgcgatcggacgcctggagcatcatgtccgccacttcggccgcgcgcgtccc
gctgtcggctga
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integrated database retrieval system
