Gemmatirosa kalamazoonensis: J421_5439
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Entry
J421_5439 CDS
T03025
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00052
Galactose metabolism
gba00511
Other glycan degradation
gba00600
Sphingolipid metabolism
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
J421_5439
09103 Lipid metabolism
00600 Sphingolipid metabolism
J421_5439
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
J421_5439
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
J421_5439
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2
Alph_Pro_TM
Motif
Other DBs
NCBI-ProteinID:
AHG92974
UniProt:
W0RPP2
LinkDB
All DBs
Position
p1:complement(932824..935643)
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AA seq
939 aa
AA seq
DB search
MNVLAFADTSGVRFEVRTPNGAALTGATVIAKITSTADRSVLWRGTLGTLADSAGTAKLV
KRVDGLRPRLWSPESPSLYLAEVNADGPRGAGAQLVRFGFRTIRAENGRIVLNGRPVFLR
GNAINPPGRNLPDSLDDSPRFALEYMRFMKAHNVNIIRLTEPNQTWFDAADSAGMLIFQG
HYGTPRGGTSTSPPKDTRAALRWYRDSVVAPQANHPSVVIYALSNEQSSPDIHYLSKNNA
AVTAFLQTAYDTLSRWDDTRLYIGNAGYGFGRAGNVCDLHRYWGWYYNSFLSFYTLRDPK
ICWRSSAMQPMTLTENTGNYTGPDGRFNLASDTKQPDSQLNWTGHAPEAEQSARALAYQA
WMAGQAIEITRRLRERNPSLSGLSPFTIAFANWHRATGVADLGAKPVVAQYARSYQPVLL
SWESWTPNVYAGSTIHPVAHVVNDDTTGRALRGVAVRWTLLDSAGTVRASGTQPFGDVAY
YAATSRAVPVALPAALPTGTYTLAGALLRGADTVSRNDTRLFVAARGDAGAAGETGTLAR
RVRVYDPSGRTTRALVALGLAPQPVTSIGALDPRRDALVVGAGSWDARLADDSAALRTFV
ERGGRAVILEQTALDAAWLPGGLRVQTSALDHPLVFPGGRPFAQGMAINPERPAHPVFDG
LSRDRFFLWSDHTGWDESKPGFPAVYPVTHGLAVTRPAELGRVALLADYDHGLEGVALAE
CFVGDGSVLVSGFDVVPRVGRDPVADRFLRNLVRYAAGDLPHEPQVRVAPTVTWGDYASE
RGAVVGIQSGLLLNTVPVVPRELGEQYPVHVDSLGFWFAGSSGGWNTRPAIQYVGRGRRP
FGPYGFTSGGSVQLAKDAGPLGEGRVWLRAPDGTRAMVTTVENPAPRALALEITVNGARS
VCPVGANATARCETPVSSPDLALTFRGDRRLVLRETAFQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgctcgcgtttgccgacacgagcggcgtgcggttcgaggtccgcacgcctaac
ggagctgcgctcacgggcgcgacggtcatcgcgaagatcacgagcaccgccgaccggtcc
gtgctctggcggggcacgttaggcacgctggccgactccgccggcacggcgaagctcgtg
aagcgcgtcgatgggctgcgtccgagattgtggagccccgagtcgccgagcctgtatctg
gcggaggtgaacgccgacgggccgcgtggggccggcgcgcagctcgtgcgcttcgggttc
cgcaccatccgcgcggagaacggccgcatcgtgctgaacggccgccccgtgttcctgcgc
ggcaacgccatcaacccgcccggccgcaacctccccgactcgctcgacgacagcccgcgc
ttcgcgctggagtacatgcgcttcatgaaggcgcacaacgtgaacatcatccgcctcacg
gagccgaaccagacgtggttcgacgcggccgattcggcggggatgctgatctttcaggga
cactacggcacgccgcgcggcggcacctcgaccagccccccgaaggacacgcgcgccgcg
ctccgctggtaccgcgactccgtcgtcgcgccgcaggcgaaccacccgagcgtggtgatc
tacgcgctgtcgaacgagcagtcgtcgcccgacatccactacctgtcgaagaacaacgcc
gccgtcaccgcgttcctgcagaccgcgtacgacacgctgtcgcggtgggacgatacgcga
ctctacatcggcaacgccggctacggcttcgggcgcgccggcaacgtgtgcgacctgcac
cggtactggggctggtactacaactcgttcctcagcttctacacgctgcgcgatccgaag
atctgctggcggtcgagcgccatgcagccgatgacgctgaccgagaacacgggcaactac
acggggcccgacggccgcttcaacctggcgagcgacacgaagcagcccgactcgcagctg
aactggaccggccacgcgccggaggcggagcagtcggcgcgcgcgctcgcgtaccaggcg
tggatggcggggcaggcgatcgagatcacgcggcggctgcgcgagcgcaacccgtctctc
tcgggcctcagcccgttcaccatcgcgttcgcgaactggcaccgcgccaccggcgtcgcg
gacctcggcgcgaagccggtcgtcgcgcagtatgcgcgcagctatcagccggtgctcctg
agctgggagtcgtggacgcccaacgtctacgcgggcagcacgatccatcccgtcgcgcac
gtcgtgaacgacgacaccacggggcgcgcgctgcgcggcgtcgcggtgcgctggacgctg
ctcgacagcgcgggcacggtgcgggcgagcggcacgcagccgttcggcgacgtggcctac
tacgccgcgacgagccgcgcggtccccgtcgcgctccccgccgcgcttcccacgggcacg
tacacgctggctggcgcgctgctgcgcggcgccgacaccgtctcgcgcaacgacacgcgg
ctgttcgtcgcggcgcgcggcgacgcgggtgcggcgggtgagaccggcacgctcgcgcgc
cgcgtgcgcgtctacgacccgagcggccgcacgacgcgcgcgctcgtcgcgttaggcctc
gcgccgcagccggtgacgtcgatcggcgcgctcgatccgcggcgcgacgcgctcgtcgtc
ggcgccggctcgtgggacgcgcggctcgcggacgactcggcggcgctgcgcacgttcgtc
gagcgtggcgggcgcgcggtgatcctggagcagacggcgctcgacgcggcgtggctgccc
ggcgggctgcgcgtgcagacgtcggcgctcgaccatccgctcgtcttccccggcgggcgg
ccgttcgcgcaggggatggcgatcaaccccgagcgccccgcgcacccggtgttcgacggg
ctgtcgcgcgaccgcttcttcctctggtccgaccacaccggctgggacgagtcgaagccc
ggcttccccgcggtctatccggtgacgcacggcctcgccgtcacgcgccccgcggagctc
ggccgagtcgcgctgctcgccgactacgatcacggactcgagggcgtcgcgctcgcggag
tgcttcgtcggtgatgggtcggtactcgtctccgggttcgacgtcgtgccgcgcgtgggg
cgcgatccggtggccgaccggttcctgcgcaacctcgtgcgctacgcggcgggcgacctg
ccgcacgagccgcaggtgcgcgtggcgcctacggtgacgtggggcgactacgcgtccgag
cgcggcgcggtcgtcggcatccagagcgggctcctcctgaacaccgtgccggtggtgccg
cgcgagctgggcgagcagtaccccgtgcacgtggattcgctaggcttctggttcgcgggg
tcgagcggcggctggaacacgcggccggcgatccagtacgtgggccgcggacggcggccg
ttcgggccgtacggcttcacctcggggggctcggtgcagctggcgaaggacgcgggaccg
ttaggcgaggggcgcgtgtggctgcgcgcgcccgacggcacgcgcgcgatggtgacgacg
gtggagaatcccgcgccgcgggcgctggcgctggagatcacggtgaacggcgcgcgctcg
gtgtgcccggtcggcgcgaacgccaccgcgcggtgcgagacgccggtctcgtcgccggat
ctcgcgctgacgttccgcggcgaccggcggctggtgctgcgcgagacggcgttccagtga
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