KEGG   Gemmatirosa kalamazoonensis: J421_5460
Entry
J421_5460         CDS       T03025                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
gba  Gemmatirosa kalamazoonensis
Pathway
gba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    J421_5460
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gba02044]
    J421_5460
Secretion system [BR:gba02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J421_5460
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 DUF2345 DUF150_C
Other DBs
NCBI-ProteinID: AHG92995
UniProt: W0RRP4
LinkDB
Position
p1:complement(958400..960556)
AA seq 718 aa
MITLKLPTADVPLDVQDFTCREGVSQLFELSILASAPRDAKSGPGLLTFDAVLGKSATVV
VDLPGGDHRFFNGIVASVEEGGVTVSAGPFAKVPYRLEIVPNLWLLGRRTQSRIFQHVTV
PDILEQVLTGLDVRFELNGTYEPRDYCTQYRETDLAFASRLMEEEGMFYFFEHKDGAHTL
VVGDTPQGHPTLPTGATIKFEPLTGGTRTDDRIQLWEKRQTITSGKVTLWDHTFELPHKN
LSADAAVVDSVTAGKVTHKLHLSVSDKLELYDYPGEYAQRFSGTAPGGGDRPADVQKIFQ
DNARTAKIRARQMDSGAVVIRGMSNCRNLASGFRFTLTNHANGDGDYLLLTVTHVGRVEA
TPPTGGPAGAAPPQNYENTFTCVPAAVVHRPPRLTPRPFVHGCQTATVVGPAGEEIFTDK
YGRVKVQFHWDRAGKNDANSSGWLRVSTSWAGQQWGAIHIPRIGQEVVVDFLEGDPDRPI
IIGSVYNAEQMPPYALPANKTQSGVKSRSSLKGTAANFNEIRFEDKKGSEQLFIHAEKNQ
DIEVENDETQWVGRDQTVKIDRDRTENVGRNETITIGGNRTESVGKAESISVADGQTVSI
GKDQSIDVGANRTVTVAKDQTTDIGEELKTTIGKNEEHTVGEARTTSVAKDDKLDVGKKL
LVQAADEIVFKTGDATITMKKDGTIKIEGKDVTIDGSGKINVKASSDVVVKGSKVAMN
NT seq 2157 nt   +upstreamnt  +downstreamnt
atgatcacgctcaagctcccgaccgcggacgtgccgctcgacgtgcaggacttcacgtgc
cgcgagggcgtgtcgcagctgttcgagctgtcgatcctggcgtccgcgccgcgcgacgcg
aagtcgggcccggggctgctgacgttcgacgcggtgctcggcaagagcgcgaccgtggtg
gtggacctgccgggcggggaccaccggttcttcaacggcatcgtggccagcgtcgaggag
gggggcgtcacggtctcggcggggccgttcgcgaaggtgccgtaccggctcgagatcgtg
ccgaacctgtggctcctcggccggcgcacgcagagccggatcttccagcacgtcacggtg
ccggacatcctcgagcaggtgctcacggggctcgacgtgcgcttcgagctgaacgggacg
tacgagccgcgcgactactgcacgcagtaccgcgagaccgacctcgcgttcgcgtcgcgg
ctgatggaagaggaagggatgttctacttcttcgagcacaaagacggcgcgcacacgctc
gtcgtcggcgacacgccgcagggccacccgacgctcccgaccggcgcgacgatcaagttc
gagccgctcacgggcggcacgcgcaccgacgatcggatccagctgtgggagaagcggcag
acgatcacgtcggggaaggtgacgctgtgggaccacacgttcgagctgccgcacaagaac
ctgtcggcggacgcggcggtcgtggactcggtgacggcggggaaggtgacccacaagctg
cacctctccgtctccgacaagctggagctctacgactacccgggcgagtacgcgcagcgc
ttctccggcaccgcgccgggcggcggcgaccggccggcggacgtgcagaagatcttccag
gacaacgcgcgcacggcgaagatccgcgcgcggcagatggactcgggcgcggtggtgatc
cgcgggatgagcaactgccggaacctggcgtcggggttccgcttcacgctgacgaaccac
gcgaacggggacggcgactacctgctgctcacggtgacgcacgtcgggcgcgtcgaggcg
acgccgccgacgggcggcccggcgggtgccgcgccgccgcagaactacgagaacacgttc
acgtgcgtgccggcggcggtggtgcaccggccgccccgcctcacgccgcggccgttcgtg
cacggctgccagacggcgaccgtggtgggcccggcgggcgaggagatcttcacggacaag
tacggccgcgtgaaggtgcagttccactgggaccgcgccgggaagaacgacgcgaacagc
tcggggtggctgcgcgtgtcgacgtcgtgggccgggcagcagtggggggcgatccacatc
ccgcgcatcggccaggaggtggtggtcgacttcctcgagggcgacccggaccggccgatc
atcatcgggtcggtgtacaacgcggagcagatgccgccctacgcgctgccggcgaacaag
acgcagagcggggtgaagtcgcggtcgtcgctcaaggggacggcggcgaacttcaacgag
atccggttcgaggacaagaaggggagcgagcagctgttcatccacgccgagaagaatcag
gacatcgaggtggagaacgacgagacgcagtgggtggggcgcgaccagacggtgaagatc
gaccgcgaccgcacggagaacgtcgggcgcaacgagacgatcacgatcggtggcaatcgc
accgagtcggtgggcaaggccgagtcgatcagcgtggccgacggccagacggtctcgatc
ggcaaggaccagtcgatcgacgtcggcgccaatcgcacggtgaccgtggcgaaggaccag
acgaccgacatcggcgaggagctcaagacgacgatcggcaagaacgaggagcacaccgtc
ggcgaggcgcggacgacgagcgtcgccaaggacgacaagctcgatgtcggaaagaagctg
ctcgtgcaggccgccgacgagatcgtgttcaagaccggcgacgcgacgatcacgatgaag
aaggatggcacgatcaagatcgagggcaaggacgtgacgatcgacggctccggcaagatc
aacgtgaaggcgtcgtcggacgtggtggtgaagggcagcaaggtcgcgatgaactga

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