KEGG   Gemmatirosa kalamazoonensis: J421_5461
Entry
J421_5461         CDS       T03025                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
gba  Gemmatirosa kalamazoonensis
Pathway
gba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    J421_5461
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gba02044]
    J421_5461
Secretion system [BR:gba02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J421_5461
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat AAA_7 Zeta_toxin AAA_25 AAA_14 AAA_24 NACHT ResIII NBD_SMAX1 Clp_N ABC_tran_CTD SRP54 FlgN
Other DBs
NCBI-ProteinID: AHG92996
UniProt: W0RQJ6
LinkDB
Position
p1:complement(960616..963387)
AA seq 923 aa
MSVNLRSLIGKLNPATRGCVESAAGLCLSRTHYDVEIEHFLTKALDATDGDLATILKHYG
VNRSRLADDLARGLDRLKSGNARTPSLSPSLVKMLTEAWTIGSIDFTAPQVRIGHCVLAL
LTNDELSRLAKDVSREFEKIPAEALKKDFATVTAPSTEAAGELGIARGGGSAAAGAPNAD
GTPKVGGRTPNLDQYTVDLTARAKAGKIDPVLGRDFEIRQVVDILTRRRQNNPILVGEAG
VGKTAVVEGFALRIVQGDVPQPLKNVTVRTLDLALLQAGAGVKGEFENRLKGLIEEVKNS
ASPIILFIDEAHTMIGAGGQAGQGDAANLLKPALARGELRTLAATTWAEYKKFFEKDPAL
SRRFQLVKVEEPSEDVCLLMMRGVVPALEAHHTVRVTDDGLDAAVRLSHRYLPDRQLPDK
AVSVLDTACARLALGQQATPAPIEDARRRLDDLGVQARVLDREAALGIDHTERLAAIAAQ
RTEVEAQLAALEARWTEESGLVEKIRGIRAQLEEAHTNGDSGLGTPDSGTDSSPESRVPS
PDELRTELAELTAKLEAVQGETPLMRVAVDASIIGEVISGWTGVPVGKMVRDQLSTMLEL
ERHLGARVIGQDHALEAISKRIRTSAAKIEDPNKPKGVFMLVGPSGVGKTETALALGDLL
YGGEQNVITINMSEFQEAHTVSTLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKA
HPDVLELFFQVFDKGRMEDGEGREIDFKNTIILLTTNAGTETIMTLTGDPETMPSVDGLA
KALKPELDKTFKPAFLGRMVVIPYFPVRDENLKKIVRLKLGKIERRLRETHKVTLVHDHT
LIDAVAARCTEVESGARNVDNILTNTMLPEIGRRLLEAIADGTKPGAIRVTVDDAGELSY
EVTPAARADGFSLAPAAAAAAPA
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgtcggtgaacctgcgatccctcatcgggaagctgaaccccgcgacgcgcgggtgcgtc
gagtccgcggccgggctgtgcctgtcgcgcacgcactacgacgtcgagatcgagcacttc
ctcacgaaggcgctcgacgcgaccgacggcgatctggcgacgatcctgaagcattacggc
gtcaatcgctcgcgcctcgccgacgacctcgcgcgcgggctcgatcggctgaagagcggc
aacgcgcgcacgccgagcctgagcccctcgctcgtgaagatgctgaccgaggcgtggacg
atcggctcgatcgacttcaccgcgccgcaggtgcgcatcggccactgcgtgctcgcgctg
ctcacgaacgacgagctgtcgcggctggcgaaggacgtcagccgcgagttcgagaagatc
ccggcggaggcgctgaagaaggacttcgcgaccgtcaccgcgccgtcgaccgaggcggcc
ggcgagctggggatcgcgcgcggcggcggcagcgcggccgccggcgcgcctaacgcggac
ggcaccccgaaggtcggcggacggacgccgaacctcgaccagtacacggtggacctcacg
gcgcgcgcgaaggcggggaagatcgacccggtgctcggccgcgacttcgagatccggcag
gtcgtcgacatcctcacgcggcgccggcagaacaacccgatcctcgtcggcgaggcgggc
gtgggcaagaccgcggtggtggagggcttcgcgctgcgcatcgtgcagggcgacgtgccg
cagccgctgaagaacgtgacggtgcgcacgctggacctcgcgctgctgcaggcgggcgcc
ggcgtgaagggcgagttcgagaaccggctgaaggggctgatcgaggaggtgaagaactcg
gcgagcccgatcatcctgttcatcgacgaggcgcacacgatgatcggcgccggcggccag
gcggggcagggcgacgcggcgaacctgctgaagcccgcgctcgcgcgcggcgagctgcgc
acgctcgccgcgacgacgtgggccgagtacaagaagttcttcgagaaggatcccgcgctc
tcgcgccgcttccagctcgtgaaggtggaggagccgagcgaggacgtgtgcctgctgatg
atgcgcggcgtggtgccggcgctcgaggcgcaccacacggtgcgcgtgaccgacgacggg
ctcgacgcggcggtgcggctgtcgcaccggtatctgcccgaccgtcagctgccggacaag
gcggtgagcgtgctcgacaccgcgtgcgcgcgcctcgcgttaggccagcaggcgacgccg
gcgccgatcgaggatgcgcggcggcggctggacgacctcggggtgcaggcacgcgtgctg
gaccgcgaggccgcgttaggcatcgaccacacggagcggctcgcggcgatcgcggcgcag
cgcaccgaggtcgaggcgcagctcgccgcgctcgaggcgcggtggacggaggagagcggg
ctcgtggagaagatccggggcatccgcgcgcagctggaggaggcgcacacgaatggggac
tcgggactcgggactccggactcggggacggattcgagtcccgagtcccgagtcccgagt
cccgacgagctgcgcaccgagctggcggagctgaccgcgaagctggaggcggtgcagggc
gagacgccgctcatgcgcgtcgcggtggacgcgtcgatcatcggcgaggtgatctccggg
tggaccggcgtgccggtcggcaagatggtgcgcgaccagctgtcgacgatgctcgagctg
gagcggcacctcggcgcgcgcgtcatcggacaggaccacgcgctcgaggcgatctcgaag
cgcatccggacgtcggcggcgaagatcgaggatccgaacaagccgaagggcgtgttcatg
ctcgtcgggccgtcgggcgtcggcaagacggagacggcgctcgcgttaggcgacctgctc
tacggcggggagcagaacgtcatcacgatcaacatgagcgagttccaggaggcccacacg
gtctccacgctgaagggctcgcccccgggctacgtcggctacggcgagggcggcgtgctg
accgaggccgtgcggcgcaagccgtactcggtggtgctgctcgacgaggtggagaaggcg
catcccgacgtgctggagctgttcttccaagtgttcgacaaggggcggatggaggacggc
gaggggcgcgagatcgacttcaagaacacgatcatcctgctgacgacgaacgccggcacg
gagacgatcatgacgctcaccggcgacccggagacgatgccgtcggtggacgggctggcg
aaggcgctgaagccggagctcgacaagacgttcaagccggcgttcctcggccgcatggtc
gtgatcccctacttcccggtgcgcgacgagaacctgaagaagatcgtgcggctcaagctc
gggaagatcgagcgccggctgcgcgagacgcacaaggtgacgctcgtgcacgaccacacg
ctgatcgacgccgtggcggcgcggtgcaccgaggtggagagcggcgcgcgcaacgtcgac
aacatcctcacgaacacgatgctccccgagatcgggcgccgactgctggaggcgatcgcc
gacggcacgaagccgggcgcgatccgggtgaccgtggacgacgccggcgagctctcgtac
gaggtgacgcccgccgcgcgcgccgacggcttctcgctggcacccgcggcggccgccgcg
gcaccggcgtga

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