Gemmatirosa kalamazoonensis: J421_5476
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Entry
J421_5476 CDS
T03025
Name
(GenBank) sigma-54 factor interaction domain-containing protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gba03000
]
J421_5476
Transcription factors [BR:
gba03000
]
Prokaryotic type
Helix-turn-helix
Other families
J421_5476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
Glycos_transf_N
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHG93011
UniProt:
W0RQL4
LinkDB
All DBs
Position
p1:983744..985399
Genome browser
AA seq
551 aa
AA seq
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MTTPELHIGIPSAYTPSVTLDAPFDVLRAITRRLATTDDLGSVLQSITQALVQRADAAVA
RVFLLMGDDECEYCRRRIEAGEQTRSTERALHLVLSAEVIDDAGAFHRIPVDSLFPVAVA
LRLGEPSLVDDWRELPPGMLDPRVTRIWRRHGIVGLAAYPLAVRGESLGAIGYVARRAIT
RTEYEVLGVFADQAAMAIKGAFLFRELERHRDRLQAENAYLQDELRADLVDVGGFDHIVG
ESPALRAVLRRVRQVASVETTVLITGETGTGKELVARAIHERSARASRPLIKINCGAIPQ
GVVESELFGHEKGAFTGALQRRVGRFELADKGSLFMDEVGELPLDTQVKLLRVLQEREFE
RVGSATPIAVDVRLVAATNRDLEREVAEGRFRADLYYRLNVFPIRIPPLRERPSDIPLLV
RHFLAHFQRKLAKPLRAMDPASMEQLQRYPWPGNIRELQNVLERACVLATEPVVKLAEPL
RMPASRVSKTGADTAPITTLDESERAHIRRALAAANGRVHGPAGAAVLLGVNPSTLRSRM
QKLGIGRGSPS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccggagctgcacatcgggatcccgtcggcgtacacgccgagcgtcacgctc
gacgcgccgttcgacgtgctgcgggcgatcacgcgccgcctggcgacgacggacgacctc
gggtcggtgctgcagtcgatcacgcaggcgctcgtccagcgcgcggacgccgcggtcgcg
cgcgtgttcctgctcatgggcgacgacgagtgcgagtactgccgccgccgcatcgaggcg
ggcgagcagacgcggagcaccgagcgcgcgctgcacctcgtcttgtcggccgaggtcatc
gacgacgccggcgcgttccaccgcatcccggtggactcgctgttcccggtcgcggtggca
ctgcgcctcggggagccgagcctcgtcgacgactggcgggagctgccgccggggatgctc
gacccgcgcgtgacgcggatctggcgccggcacgggatcgtcggcctcgccgcgtacccg
ctcgccgtgcgtggggaatcgttaggcgcgatcggctacgtcgcgcgccgcgcgatcacg
cgcacggagtacgaggtgctcggcgtgttcgccgaccaggcggcgatggcgatcaagggg
gcgttcctgttccgcgagctggagcgccaccgcgaccggctgcaggcggagaacgcgtac
ctgcaggacgagctgcgcgcggacctggtggacgtgggcggcttcgaccacatcgtcggc
gagagccccgcgctacgcgccgtgctgcgccgcgtgcgccaggtcgcgtcggtggagacg
acggtgctcatcaccggcgagacgggcacgggcaaggagctcgtcgcgcgcgcgatccac
gagcgcagcgcgcgtgcgtcgcggccgctgatcaagatcaactgcggcgcgatcccgcag
ggcgtcgtggagtcggaactgttcggccacgagaagggcgcgttcaccggcgcgctgcag
cgccgcgtcggccggttcgagctcgcggacaagggctcgctgttcatggacgaagtcggc
gagctgccgctcgacacgcaggtgaagctcctgcgcgtgctgcaggagcgcgagttcgag
cgcgtcggcagcgcgacgccgatcgcggtggacgtgcgcctcgtcgcggcgacgaaccgc
gacctggagagggaggtggcggagggccgcttccgcgcggacctgtactaccggctgaac
gtgttcccgatccgcatcccgccgctgcgcgagcggccgagcgacatcccgctgctcgtg
cgccacttcctcgcgcacttccagcgcaagctcgcgaagccgctgcgcgcgatggatccg
gcgagcatggagcagctccagcgctatccgtggccgggcaacatccgcgagctgcagaac
gtgctggagcgcgcctgcgtgctcgcgacggagccggtggtgaagctcgccgaaccgctg
cgcatgccggcgagccgcgtgtcgaagacgggcgccgacaccgcgccgatcacgacgctc
gacgagagcgagcgcgcgcacatccgccgcgccctcgccgcggcgaacggccgcgtgcac
gggccggccggggcagcggtgctgctcggcgtgaatcccagcaccctgcggtcgcgcatg
cagaagctggggatcgggcggggctcaccttcttga
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