Gemmatirosa kalamazoonensis: J421_5589
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Entry
J421_5589 CDS
T03025
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00350
Tyrosine metabolism
gba00360
Phenylalanine metabolism
gba00380
Tryptophan metabolism
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
J421_5589
00360 Phenylalanine metabolism
J421_5589
00380 Tryptophan metabolism
J421_5589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gba04147
]
J421_5589
Enzymes [BR:
gba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
J421_5589
4.1.1.105 L-tryptophan decarboxylase
J421_5589
Exosome [BR:
gba04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
J421_5589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
DUF1148
Motif
Other DBs
NCBI-ProteinID:
AHG93124
UniProt:
W0RQ49
LinkDB
All DBs
Position
p2:13165..14604
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AA seq
479 aa
AA seq
DB search
MTPEEFRAEAHRLVDFIADYRRDVERHPVMAQVAPGDVRRALPAEPPERGEPFDAILRDV
ERVIVPGLSHWQHPRFFGYFPSNGLLASVLGDFLSTGLGVLGLSWQSSPALTELEEVACN
WARRMLGLSDAWSGVIQDTASTSTLVALLCARERASDFSEARGGLQETGAAPLVVYFSEQ
AHSSVQKAALLAGFGRAHLRLIPCDAAYAMRPDALAEAMARDVAAGMRPCAVVATTGTTT
TTALDPLAPIAAVARAHGVWLHVDAAMAGSAMILPECRWMWDGVESADSLIVNAHKWLGA
AFDCTLYFVRDPQHLVRVMSTNPSYLRSSADAEVKNFRDWGIPLGRRFRALKLWCLVREQ
GVEGLRARLRRDLENARWLEAQVRADRDWRVLAPAPLQTLCVRHAPAGLDGDALDRHTLA
WVERVNRSGEAYLTPAMLDGRWMVRVSIGAYPTERAHVDALWTAMRAAAHATDETQAAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaagagttccgcgccgaggcgcaccggctcgtcgacttcatcgccgactac
cgccgcgacgtcgagcgccaccccgtgatggcgcaggtcgcgccgggcgacgtgcgccgc
gcgctccccgccgagccgccggagcgcggggagccgttcgacgcgatcctgcgcgacgtc
gagcgcgtgatcgtgccgggactctcgcactggcagcacccgcgcttcttcggctacttc
ccgtcgaacggcctgctcgccagcgtgctcggcgacttcctgagcacggggctcggcgtg
ctcgggctctcgtggcagtcgagtcccgcgctcacggagctcgaggaggtcgcgtgcaac
tgggcgcgccggatgttaggcctctccgacgcgtggagcggcgtgatccaggacaccgcg
tcgacgagcacgctcgtggcgctgctctgcgcgcgcgagcgcgcgtccgacttctccgag
gcgcgcggcgggctgcaggagacgggcgccgcgccgctcgtcgtgtacttctccgagcag
gcgcatagctcggtgcagaaggccgcgctgctcgccggcttcgggcgagcgcatctgcgt
ctgataccatgcgacgccgcgtacgccatgcgacccgacgcgctggccgaggcgatggcg
cgcgacgtcgcggccgggatgcgcccatgcgcggtcgtcgcgacgacgggcacgaccacc
accaccgcgctcgacccgctcgcgccgatcgccgccgtcgcgcgcgcgcacggcgtgtgg
ctgcacgtcgacgcggcgatggccgggtcggcgatgatcctgcccgagtgccgctggatg
tgggacggggtggagagcgccgactcgctcatcgtcaatgcgcacaagtggctcggcgcg
gcgttcgactgcacgctgtacttcgtgcgcgacccgcagcacctcgtgcgcgtgatgtcg
acgaacccgagctacctgcgctcctcggccgacgcggaggtgaagaacttccgcgactgg
gggattccgttaggccgccgcttccgcgcgctgaagctgtggtgcctcgtgcgcgagcag
ggagtggaagggctgcgggctcgcctgcgccgtgacctcgagaacgcgcggtggctggag
gcgcaggtgcgcgcggaccgcgactggcgcgtgctcgccccggccccgctgcagacgctg
tgcgtgcgccacgcgcccgcgggcctcgacggcgacgcgctcgaccggcacacgctggcg
tgggtcgagcgcgtcaaccgctccggcgaggcgtacctcacgccggccatgctcgacggg
cggtggatggtgcgcgtgtcgatcggcgcgtacccgacggagcgtgcgcacgtggacgcg
ttgtggacggcgatgcgcgccgccgctcacgccaccgacgagacccaggccgcctcgtag
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