Gemmatirosa kalamazoonensis: J421_5609
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Entry
J421_5609 CDS
T03025
Name
(GenBank) Periplasmic binding protein domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba02010
ABC transporters
gba02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J421_5609
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
J421_5609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_5609
Transporters [BR:
gba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
J421_5609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
PucR
Motif
Other DBs
NCBI-ProteinID:
AHG93144
UniProt:
W0RQ70
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All DBs
Position
p2:40653..41651
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AA seq
332 aa
AA seq
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MTRRSLIAVAVVALLAACSKSADSGKGPLTIAVIPKGTTHEFWKSIHAGAEQAARELSAQ
GDSVVIIWKGPIREDDREQQVQVVEGFVSQGVKGMVLAPLDRQALVRPVEEAQRAGVPTV
VIDSRLDTDSIVGYVATDNLKGGQLAADRLGELLGGKGKVLVLRYQEGSASTMERERGFL
EELKAKYPGITLVSSDQYSGPTRETAKRAAENLLNRFGADLQGIFTPNESSTIGMLLALQ
DIGKAGSVRLVGFDAGQTLLTALRAKQIQGLVVQNPMRMGYLGVKTMVDHLRGRPVSKLV
DTGVMLVTPENVDSAQVQQVVSPPIAKYLPGG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccagacgatctctgatcgccgtcgccgtagtcgcactgctcgccgcctgcagcaag
agcgccgacagtggaaagggtccgctcaccatcgcggtcatcccgaagggcaccacgcac
gagttctggaagagcatccacgccggcgccgagcaggcggcgcgcgagctgtcggcgcag
ggcgactccgtcgtcatcatctggaagggccccatccgcgaggacgaccgcgagcagcag
gtgcaggtcgtcgagggattcgtgagccagggcgtgaaggggatggtgctcgccccgctc
gaccggcaggcgctcgtccgccctgtcgaggaggcgcagcgcgccggcgtgccgaccgtc
gtgatcgattcgcggctcgacaccgattccatcgtcggctacgtcgccaccgacaacctg
aagggcggccagctcgccgccgaccggctcggcgagctgttaggcggcaagggcaaggtg
ctcgtgctccgctatcaggaaggctcggcgagcacgatggagcgcgagcgcggcttcctc
gaggagctgaaggcgaagtaccccggcatcacgctcgtctcgtcggaccagtactcgggc
cccacgcgcgagacggcgaagcgcgccgcggagaacctgctgaaccgcttcggcgccgac
ctgcaggggatcttcacgccgaacgagtcgtccaccatcggcatgctgctcgccctgcag
gacatcggcaaggcgggctcggtgcggctcgtcggcttcgacgcgggacagacgctgctc
accgcgctccgcgcgaagcagatccaggggctcgtcgtgcagaacccgatgcgcatgggc
tacctcggcgtgaagacgatggtggatcacctgcgcggccgccccgtgtcgaagctcgtc
gacaccggcgtgatgctcgtgacgccggagaacgtcgactcggcgcaggtgcagcaggtc
gtgagcccgccgatcgcgaagtacttgccgggcggatga
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