Gemmatirosa kalamazoonensis: J421_6295
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Entry
J421_6295 CDS
T03025
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_6295
Transporters [BR:
gba02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J421_6295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
Motif
Other DBs
NCBI-ProteinID:
AHG93830
UniProt:
W0RU41
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All DBs
Position
p2:940410..942008
Genome browser
AA seq
532 aa
AA seq
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MTSRLRLLLACAAALPIALAGCKPDKLLDVVSPTTVSDDIFWSQENDAVIFLNGTYSALP
SWITVIELDGLTDDGTTNRQFDDRYVYSDGSFDPQKPYSRNHWNNFYNGVARANALIANI
DRIPAGRIDPARKARYVAEAKFLRGVFYLQLVSMFGDVPMPLTPLTDAEARKMTNTPAAK
IYDQVLADLDAAAAVLPTTYTGADVGRATKGAALAFKARAALYAGRYQIAADAAKAVMDL
GIYRLNADYGQLFLYAGENSPEIIFAHKYSKTAQAAGQNNNIFGEFGPPSNSASAHMVPI
RNLVDSYQMTDGKSIKDSPLYNPAPDKMYLNRDPRLAATILFPGASWDGRTFDSRPKPLS
TQPEAIDLQNENTSVTGYYIRKWIDLTDKTDRGNGGIDVSLMRYADVLLMYAEAKLEAGQ
PDASALAALNQVRARVSMPPVAALTRDAVRYERRAELAFEGLRLFDIRRWKIAEQVMPTP
VVTGIDYIDASGQLRTATVPASARAFPQRDYLWPIPQAELDLNQNLKQNPGF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagactccgcctcctgctggcctgcgcggccgctctgccgatcgcgctcgcc
ggctgcaagcccgacaagctgctcgacgtcgtgtcgccgaccaccgtgtcggacgacatc
ttctggtcgcaggagaacgacgcggtcatcttcctgaacggcacgtacagcgcgctcccg
tcgtggatcaccgtcatcgagctcgacggcctcaccgacgacggcacgacgaaccgccag
ttcgacgaccgctacgtgtactccgacggatcgttcgatccgcagaagccctattcgcgc
aaccactggaacaacttctacaacggcgtcgcccgcgcgaacgcgctgatcgcgaacatc
gaccgcatcccggcgggtcgcatcgacccggcgcgcaaggcgcggtacgtggccgaggcg
aagttcctgcgcggcgtgttctacctgcagctcgtgagcatgttcggcgatgtgccgatg
ccgctcacgccgctcaccgacgccgaggcgcggaagatgaccaacacgccggcggcgaag
atctacgaccaggtcctcgccgacctcgacgccgccgcggccgtgctgccgacgacgtac
accggcgccgacgtcggtcgcgcgacgaagggcgcggcactcgcgttcaaggcgcgcgcc
gcgctgtacgccggccgctaccagatcgccgccgacgccgcgaaggcggtcatggatctc
ggcatctaccggctgaacgccgactacgggcagctcttcctgtacgccggcgagaacagc
cccgagatcatcttcgcgcacaagtactcgaagacggcgcaggcggcggggcagaacaac
aacatcttcggcgagttcggcccgccgtcgaactccgccagcgcccacatggtgccgatc
cgcaacctggtcgactcgtaccagatgacggacggcaagtcgatcaaggactcgccgctg
tacaacccggcgccggacaagatgtacctcaaccgcgacccgcgtctcgccgcgacgatc
ctgttccccggcgcgtcgtgggacggccgcacgttcgactcgcggccgaagccgctctcc
acgcagcccgaggcgatcgacctgcagaacgagaacacgtcggtgaccggctactacatc
cgcaagtggatcgacctcaccgacaagaccgaccgcggcaacgggggcatcgacgtgagc
ctgatgcgctatgccgacgtgctgctgatgtacgccgaagcgaagctcgaggcggggcag
cccgacgcgtcggcgctcgccgcgctgaaccaggtgcgcgcgcgcgtgagcatgcccccg
gtggccgcgctcacccgtgacgcggtgcgctacgagcgccgtgccgagctcgcgttcgag
gggctgcgcctgttcgacatccgccgctggaagatcgccgagcaggtgatgccgacgccc
gtcgtgacggggatcgactacatcgacgcgagcggccagctccgcaccgccaccgtcccc
gcctccgcccgcgcgttcccgcagcgcgactacctgtggccgatcccgcaggcggagctc
gatctcaatcagaacctgaagcagaaccccggcttctga
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