Candidatus Comchoanobacter bicostacola: MMH89_00785
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Entry
MMH89_00785 CDS
T08376
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Pathway
gbac03420
Nucleotide excision repair
gbac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMH89_00785
03430 Mismatch repair
MMH89_00785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbac03400
]
MMH89_00785
Enzymes [BR:
gbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMH89_00785
DNA repair and recombination proteins [BR:
gbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMH89_00785
MMR (mismatch excision repair)
Other MMR factors
MMH89_00785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_12
API5
Ish1
DEAD
nSTAND_NTPase5
ResIII
Motif
Other DBs
NCBI-ProteinID:
UTC24699
UniProt:
A0ABY5DLF8
LinkDB
All DBs
Position
complement(159871..162027)
Genome browser
AA seq
718 aa
AA seq
DB search
MNIIVSANKEILVDISEIIDTLNPQQREAATALRSNVLVLAGAGSGKTRTMVHRIAYLIT
TGQAHWHQILAVTFTNKAANELKHRVAKLLPQQQQSNLWTGTFHSICHKLLRIHSKECQL
NDHFQVIDTDEQIRIIKKIHKKMQLDDKQWPHKKTLHHINAQKEHGMRAQDCYDESTVYL
KTISELYQSYEKYCKTEHLVDFTELMLAVCELLESNESIRWRYQKQFKHILIDEFQDTNT
LQYRLIKNLTGSEQCIFAVGDDDQSIYSWRGARVDHMFAFEKDFSPVTTVKLEQNYRSTK
AILDAANHVIRNNEHRLAKSLWTDSEVGEKIKLYSAYNEIDEAQFVCEQIQTLRDDVRLQ
ECAILYRSNAQSRIFEEKLSHMGIAYRVYGGLRFFDRSEIKDILAYLRLVANPDDNLAFE
RVVNLPPRGVGKVTLDKIRSYSLEHTCSLWQSLQIMLETQKSESLHQFTHIIEQAHTYRG
NLQELITHIIDGSNIKAYWKNQKNIQADSKIENIDELVNAAKSYESQEPDYDPLSEFLSN
VVLDQNREQMTQSDQVQLMTLHASKGLEFQYVFLVGVEEDLFPHKMTHADPAQVEEERRL
CYVGMTRARTQLYISYAETRRQFGQEHYQRPSRFIQEIPQDALESIRLGNAQTAYPTQSN
NAYHFKLGQTVFHKKFGEGIVLNYEEDGDNSRVHVRFSQAGAKWLLCAYANLANHPVT
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattatagtatctgcaaacaaagagattctcgtggatatttcagaaattattgat
acactcaatcctcagcaacgtgaggcagcaacagcacttaggtccaatgtactcgtacta
gcgggggctggctctggaaaaacaagaactatggtgcaccgtatcgcgtacttaattacg
actgggcaagcacactggcatcaaattctagctgtcacatttaccaacaaagctgcaaat
gaactgaaacacagagtagcgaaattactacctcaacaacaacagtctaacttatggaca
gggacatttcacagtatttgccataaacttctgcgaatacatagtaaagaatgtcaactt
aatgatcacttccaagttattgatactgatgagcaaatacgcatcataaaaaaaatacat
aaaaaaatgcagcttgatgataaacaatggcctcataaaaaaacactgcatcatattaat
gcgcaaaaagagcatgggatgcgtgcgcaagactgttatgatgaaagcactgtgtatctc
aaaacaattagtgagctataccagagctacgaaaaatactgtaaaacagagcatttagtt
gattttactgaattaatgcttgctgtctgtgaattacttgaatcgaacgaatccattcgc
tggcgatatcaaaaacaatttaagcatatactaattgatgagttccaggataccaatacg
ctacagtaccgtttaataaaaaacctaacaggtagtgagcagtgtatttttgcagtgggt
gatgatgatcaatctatttacagttggcgtggtgcacgagttgatcatatgtttgcattt
gaaaaagacttttcacctgtcactacagttaaactagaacagaattatcgatccacaaaa
gctattttagatgcagctaatcatgtaatacggaataatgaacaccgactggctaaatca
ctatggactgactctgaagtcggtgaaaaaattaagttatattctgcttataatgaaata
gatgaagcacaattcgtctgtgagcagattcaaacacttagagatgatgtgagacttcag
gaatgtgctatattgtaccgctcaaatgcacaatctcgaatctttgaagaaaaattaagc
cacatgggtattgcttaccgtgtttatgggggactcaggttttttgaccgttccgaaatc
aaagacattctagcttacttaagactagtcgcaaacccagatgacaatcttgcattcgaa
cgtgtggttaatcttcctcctagaggtgttgggaaagttacactggataagatacggagt
tatagcctagaacatacctgctcactgtggcaaagcttacagataatgctagaaactcaa
aaatcagagtcactacatcaatttacacacatcattgagcaagcgcacacatatagaggc
aatctacaggaactcataacccacatcattgatggcagtaatatcaaagcctattggaag
aaccaaaaaaacattcaagcagactctaaaattgaaaacattgatgaacttgtaaacgcc
gcaaagtcttatgaaagccaagaacctgattatgatccactgagtgaatttctaagcaat
gtagttctggatcaaaatagagaacaaatgacacaaagtgaccaagtccaactaatgacg
cttcatgcatccaaaggtttagagttccaatatgtctttttagtgggcgtcgaagaagat
ttattcccacataaaatgacacacgcagaccctgcccaagttgaagaagaacgaagactt
tgctacgtaggcatgactcgtgcccgcactcaactttatatttcctacgcggagacccgt
cgacaatttgggcaagaacactaccaaagaccttcgcgattcatccaagaaataccacaa
gatgcattagaaagcattcgattaggtaatgctcaaacagcatatcctactcaatcaaat
aacgcctatcattttaaattggggcaaactgtatttcacaaaaaatttggagagggtatt
gtgcttaattatgaagaagatggcgacaacagccgagtacatgttagatttagccaagcc
ggtgctaaatggctactttgtgcctatgcaaatctagcgaaccaccctgttacttga
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