Candidatus Comchoanobacter bicostacola: MMH89_01470
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Entry
MMH89_01470 CDS
T08376
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Pathway
gbac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMH89_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbac03019
]
MMH89_01470
03016 Transfer RNA biogenesis [BR:
gbac03016
]
MMH89_01470
Enzymes [BR:
gbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MMH89_01470
Messenger RNA biogenesis [BR:
gbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MMH89_01470
Transfer RNA biogenesis [BR:
gbac03016
]
Prokaryotic type
tRNA degradation factors
MMH89_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH_2
S1_RRP5
S1_2
CSD
Motif
Other DBs
NCBI-ProteinID:
UTC24821
UniProt:
A0ABY5DM59
LinkDB
All DBs
Position
complement(301638..303767)
Genome browser
AA seq
709 aa
AA seq
DB search
MTLSKSVQHSFEYNTKTITLSSNFAQQADGSVLLSIGDTRIHAVISSVQSDEKNDFFPLL
VQVLRKHYASGSITGGHIKRENTRGNESEIIASRLVDRALRPLFPEGYSNEVQIFIEILS
TDPSVDLEVPCFLAASAALAVSKLPFTHAVAAVKVGRVGGKYIINPTSDELASSDLNLLL
AGKPAGSVNDIVMIEAQAKEVSEDDVLKSFQLGLEAMNDATAGISSFAEKHKAEHPEFAK
ETLNTETATSLLTDAEINSAHSAYENSLSMPSKKERNAYLSAQHKQIAETLVNEEITSKQ
VMDELNSLRKDWVYQYMLKNKKRIDGRDFDTVRPINIQTNILPRVHGDAIFQRGETSALA
TATLAPPGKGEYMELLSGAEIQRSFMLYYNFPHYSVGEVGRMGPPKRREIGHGILARKAL
EPVLPSQELFPYTLRVVSEIMSCNGSSSMASVCGGSLALRAAGVPIKSHVAGVAMGLVLD
GETPHILTDILGDEDHIGDMDLKVAGTESGITALQMDIKIDGITHEMLSTAIHKAKIART
TILSEMDKALPKENEVSGYAPRMINFDIKTEKIKDVIGKGGSVIRGLIEQFGVEIDISDS
GTITIASSENSNAEACKAHILELVSELEVGQVFAGKITKILDFGAVVAFGGGKDGFLHIS
QISYERINEIRDYLSEGQEVTVKVTEIDRNNKVRLSMKDLGSDSQDGQE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgacattatcaaaatcagttcaacatagctttgaatacaacactaagaccataacacta
tcaagcaactttgctcaacaggcagatggtagtgtacttttatccattggcgatactcga
attcatgccgtgatttcaagtgtacagagtgatgaaaagaatgacttcttcccacttctt
gtgcaggttttaagaaaacattatgcaagcggatcaatcacaggcggtcatatcaaacgt
gagaacacgcgtggaaacgaatctgaaatcatcgcatcacgcttagttgatagagcactt
agacctctctttcctgagggatacagcaatgaagtacaaatctttattgagatcctgtct
acagacccaagtgtagatctagaagtgccttgcttccttgcagcaagtgctgcacttgct
gtatcaaaacttcctttcacacatgctgtggctgctgttaaagtaggtcgcgtaggtgga
aagtatatcatcaacccaacgtctgatgaattagcttcatcagacttgaacttactactc
gctggaaagccagctggatcagtcaatgacatcgttatgattgaagcacaagcaaaagaa
gtaagtgaagatgatgtacttaagtcattccaactgggtctagaagcaatgaatgatgca
acagcagggatctcatcatttgcagaaaagcacaaagcagagcatcctgagtttgcaaaa
gaaactcttaatacagaaacagccacctctctacttactgatgctgaaataaatagcgca
cattcagcctatgaaaacagcttaagcatgccaagtaagaaagagcgtaatgcataccta
tcagcacaacataagcagattgctgaaacacttgttaatgaagaaatcacctccaagcaa
gttatggatgagcttaacagcttaagaaaagactgggtatatcaatatatgctcaagaat
aagaaaagaattgatgggcgtgactttgacacagtgagacctattaatatacaaaccaat
atcctacctagagttcatggtgatgcaatattccaacgtggtgaaaccagtgcattagcc
actgcaacattagcacctcctgggaaaggtgaatacatggaattactgtctggtgcagaa
attcaacgttcattcatgctttactataacttccctcactattcagtaggtgaagttggt
cgtatgggccctccaaagcgtagagaaataggacatggaattttagcaagaaaagcgctg
gaacctgtgttacctagccaagaattatttccatacacattaagagttgtatcagaaatc
atgtcatgtaacggttcaagttctatggcgagcgtctgtggtggcagtctagcgctaaga
gcggccggagtacctatcaagtcacatgttgctggtgtagcaatgggactcgtacttgat
ggagagaccccacacatactaactgacattcttggtgatgaagaccacatcggagatatg
gacttaaaggttgctggaactgaaagcggaattactgcgcttcaaatggatatcaagata
gacgggatcactcatgaaatgctgtctactgccattcataaggctaaaatagcacgtaca
actattcttagtgagatggacaaagcattacctaaagaaaatgaagtttcaggatacgct
cctagaatgatcaactttgacatcaagactgaaaaaataaaagatgttattggtaaaggt
ggatctgttatccgtggactcattgaacagtttggtgttgagattgatatttcagacagt
gggacgataacgattgcctcatctgaaaacagcaatgctgaagcgtgtaaagctcacata
cttgagctggtatccgaattagaagttggccaagtatttgctggaaaaataaccaagata
ctagactttggtgcagttgttgcctttggtggtggaaaagatggatttttacatatttct
caaatttcatatgagcgaattaatgaaatcagagattatctctctgagggacaggaagtt
acggttaaagtcacagaaatagaccgtaacaataaagttagactttcaatgaaggacctt
ggatctgactcacaggatggacaggaataa
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