Candidatus Comchoanobacter bicostacola: MMH89_01480
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Entry
MMH89_01480 CDS
T08376
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbac03016
]
MMH89_01480 (truB)
Enzymes [BR:
gbac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MMH89_01480 (truB)
Transfer RNA biogenesis [BR:
gbac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMH89_01480 (truB)
Prokaryotic type
MMH89_01480 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CoV_M
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UTC24823
UniProt:
A0ABY5DK11
LinkDB
All DBs
Position
complement(304142..305017)
Genome browser
AA seq
291 aa
AA seq
DB search
MINGFLAISKPHGITSHQCVAIVKKKYHAKVGHTGTLDPMATGAMILSLNDATKFSQWII
ARDKAYTATIKLGQQTSTDDATGQTINEQTPPSLTITQITEVLSKFTGEINQVPPKFSAI
HINGKRAYKLARAEASFELPTRLVTIHSNKLIHYNKTTSEIIIETHCGSGTYIRSLARDI
GHELGTYAHLNQLHRRWVAPFQNNTYIPLDNLPDTPPIISLEEAFSQYPRINLTQTQTQN
LIHGKQISTENKIQNTPTTAFYNEQFIGMLTFTNHNTYKSIKLINTKHITL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgattaatggattcttagcaatctcaaaacctcacggcatcacgtcgcatcaatgtgtt
gcaatcgtaaagaaaaaatatcatgcaaaagttgggcacacaggaacactcgaccccatg
gctactggagctatgattctatcgctgaatgatgcaactaagtttagtcaatggatcatt
gctcgagataaggcctatactgctacaatcaaattagggcagcaaaccagcactgacgat
gcaactgggcaaaccattaatgagcaaacacctccctcgttaactattacccaaattact
gaagtactctcaaagttcacaggagaaatcaatcaagtcccacctaagtttagcgccata
catattaacgggaaacgtgcttataaacttgctcgtgctgaagctagttttgagctgccc
acacgattagtcactattcacagcaacaaactcatacactataacaaaacgacttccgaa
ataattattgagactcactgcggatcaggcacgtatattcgttcattagcccgtgatatc
ggccatgaattaggaacctatgcacatttaaatcaactgcataggcgatgggtagcaccc
tttcaaaacaacacctatattcctttagataatttaccagacaccccccctattatttcc
cttgaagaagcatttagccaatacccgcgtataaacttgacacaaacacaaacacaaaac
ctaatacatggaaagcaaataagtactgaaaacaaaatccaaaacacccctactacagct
ttttacaatgagcaattcattggcatgcttacatttactaaccataacacttacaagagt
attaaactcatcaatacaaaacacatcaccttgtag
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