Candidatus Comchoanobacter bicostacola: MMH89_02340
Help
Entry
MMH89_02340 CDS
T08376
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Pathway
gbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMH89_02340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbac03400
]
MMH89_02340
Enzymes [BR:
gbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMH89_02340
DNA repair and recombination proteins [BR:
gbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMH89_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
PIF1
NTPase_1
nSTAND3
AAA_22
DEAD
AAA
AAA_16
T2SSE
ResIII
AAA_14
RsgA_GTPase
NPHP3_N
PhoH
UvrD-helicase
TrwB_AAD_bind
Cdd1
UvrD_C
CbiA
AAA_28
AAA_5
ATP_bind_1
AAA_25
AAA_18
NACHT
SLFN-g3_helicase
AAA_29
MeaB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UTC24983
LinkDB
All DBs
Position
complement(487120..489234)
Genome browser
AA seq
704 aa
AA seq
DB search
MTEATISGICERVIYHNEENGYTIFKINTDQGITITCTGSSPLIKEKQNLRITGTWNNNP
KYGKQLDSSIIIPIIPKDKHSMLQYLSSGVIPGIGEGFAKKLIDFAGTQLFEVLDKDPAS
LYEIKGVGKKRIETLLSHWQMHRASHEVLMFLQGFGIGPKRANKIFQTYQMDTMSVLQSD
PYRLSQDIHGIGFKLADQIACKTGIAQDAPCRILACIHFILDSASQQGHCYLPFADVPKK
VEQHIEVVISTPELEAIIKDDNLFVHEQQKLYLKKIYQAEQELIQSIQRLNQGENAWPLS
IQRYSLSDLSCSGHQLSQSQQSAIQNTLSQKIGIITGGPGVGKTTITQAILQLAKEAKLR
ILLCAPTGRAAKKLSSCTNHSAKTIHRLLKIDPATKKFKHNDNSPLQADIILIDECSMID
VFLARSLFAAIPDYANVVLVGDIDQLPSVGPGAFLNDMIQLNPDKTAYLTEIYRQGQDSM
IIQNAHRINQGKTLLPNQLDQLSDFYFISETCPDTLHQRIHTLVTQRIPKRFSLNPMSDV
QILSPMHKGDLGTGKLNELLQDILNPQHNKTSFKFRVGDKIIQTRNNYDKDVFNGDIGFV
VEIDSNRKEVTINFNDSYVCYLFSELDEIQLAYAISIHKSQGSEYPAVIIPLAMQHFTLL
ERNLIYTAVTRGKKLVIIIGDLKALNMAIRNKKSHKRNTTKFSL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcaacaatatctggcatctgtgaacgcgttatatatcacaacgaagagaat
ggatataccattttcaaaatcaatactgatcaaggcattacgataacatgcaccggctcg
tcaccactgattaaagaaaaacaaaacttacgcataacaggcacatggaataataacccc
aaatacggaaagcaacttgatagcagcattatcattcctatcattcctaaagacaaacac
agcatgttgcaatatttatcttcaggagtgatcccaggcatcggtgaaggatttgctaaa
aaactaatcgactttgctggcactcaattatttgaagtactggataaagaccctgcatct
ctttatgaaatcaaaggggttggaaaaaaaagaattgaaaccttattaagccactggcaa
atgcaccgtgcaagccacgaggtattgatgtttttacaaggctttggaatcggccctaaa
cgagcaaataaaatctttcaaacctaccaaatggacacaatgtccgttttacaatcagac
ccttaccgcttatcacaagatatccatggaataggctttaagcttgctgatcaaattgcc
tgtaaaacaggtattgcccaagatgcaccatgtcggatactcgcatgcatacactttatt
ttagactcagcatcacagcaggggcactgctacctaccctttgccgatgtccctaaaaaa
gttgaacaacacattgaagtcgtcatttcaaccccagaacttgaagcgatcattaaagat
gacaacctgtttgtacatgagcaacaaaaactttatctaaaaaagatctaccaggctgag
caagagttaattcaatctattcaaagactcaatcaaggtgaaaatgcatggccgctttca
atacaaagatatagcttatctgatttatcatgctcaggacaccaactctctcaatcacag
caatcagccattcaaaatacgcttagtcaaaaaatagggattataaccggtgggccaggt
gtcgggaaaaccaccatcactcaagctatattacaacttgctaaagaagctaaattacgc
attttgttgtgtgcacctacaggcagagctgcgaaaaaactctcaagctgtaccaaccac
tcagccaaaacaattcatagactgcttaaaattgaccctgcaacgaaaaaattcaagcat
aatgacaatagtccgctgcaagcagacattattcttattgatgagtgctcaatgattgac
gtatttctagcacgcagcttatttgcagcaatacctgattatgccaatgttgtattagta
ggcgacatcgatcagctgccctcagttggacccggtgcttttttaaatgatatgattcaa
cttaatcctgacaaaacagcttatctcaccgagatctatcggcaagggcaagattcaatg
attattcaaaatgcacaccgaattaatcaaggaaagaccctcctgcccaatcaactcgac
caattatctgacttttattttatcagtgagacttgcccggacacgctccaccaacgaata
catacgctagtcacgcagaggataccaaaacgtttttcacttaaccccatgtctgatgta
cagattttaagccccatgcacaaaggagaccttggcactggcaaactaaatgagctactt
caagatatcttaaacccgcaacacaataaaacatcttttaaattcagggttggagacaaa
atcatacaaacacgtaacaattatgataaagatgtctttaatggcgacataggctttgtt
gtagaaatagactctaatcgaaaagaagttactattaatttcaatgattcatacgtttgc
tacttattctctgaacttgatgaaattcaacttgcctatgccatcagcattcataaatca
caggggtctgaatatcctgcagttatcatccctcttgcaatgcaacactttaccctactc
gagcgaaatctaatttatactgctgtcacgaggggtaaaaagttggtcattattattggc
gatttaaaagcactcaatatggcgatacgcaataaaaaaagtcataaaagaaataccact
aagtttagtctatag
DBGET
integrated database retrieval system
