Candidatus Comchoanobacter bicostacola: MMH89_03425
Help
Entry
MMH89_03425 CDS
T08376
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Pathway
gbac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMH89_03425 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbac03021
]
MMH89_03425 (rpoA)
03400 DNA repair and recombination proteins [BR:
gbac03400
]
MMH89_03425 (rpoA)
Enzymes [BR:
gbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMH89_03425 (rpoA)
Transcription machinery [BR:
gbac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMH89_03425 (rpoA)
DNA repair and recombination proteins [BR:
gbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMH89_03425 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UTC24274
LinkDB
All DBs
Position
complement(727297..728274)
Genome browser
AA seq
325 aa
AA seq
DB search
MNLEKAYSTLIPNDIQSAELGDNIMKISLQPFERGFGYTLGNALRRILLSSMPGSAVSAF
KIEGATHQFASIEGVQEDLVEVMINMKSVVISLEDEHEEAHLSIDFQGPGTITAADIDTQ
GKAKVHNPELVIATVNASRAVRIDLVVSRGVGYVPASESQVEVDVDMIKLDASFSPIHRA
ICKVENARVGNKTDLDKLVIEIESNGSINPEDAIKWAANILQHQLSAFVELHVVEKVEDK
PKSSINPRLYERVDALELTVRAANCLKSENIRYIGDLVTRSEAQLLRTPNLGRKSLAEIK
NILADQGLSLGLHVEGWESPDQSKV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaaaaagcatattccacgctaattccaaatgacattcagtcagcagagttg
ggcgataatataatgaaaataagcttgcaaccattcgagcgtggttttggttacacctta
ggtaatgcattacgcagaattctgttgtcttcaatgccaggctctgcagtatctgcattc
aaaattgagggtgcaacccaccagtttgcttcaatcgaaggtgttcaagaagatctagtt
gaagtaatgattaatatgaagtcggttgttatttcgttagaagatgagcatgaagaagct
catttgtctatagattttcaaggtccaggaacaattactgctgcagatatagatacccag
ggtaaagcaaaggtacataatcctgagcttgtaattgcaactgttaacgccagtcgtgca
gtacgtattgatcttgttgtttctcgcggtgttggttatgtacctgcttctgagagccaa
gtagaggttgatgtagatatgatcaaattagatgcatcattttctccaatacaccgtgca
atttgtaaggttgagaatgctcgtgtaggtaacaaaacagacttagacaagcttgtcata
gaaatagaatcaaatggttctattaaccctgaagatgcaattaagtgggctgcaaatata
ttacagcatcagttatctgcttttgttgagttgcatgttgtcgaaaaggtagaagataag
cctaagtcttctattaacccaagactatatgagcgtgttgatgctctagagttaacggtc
agagctgctaactgtctaaaatccgaaaacattcgttatattggtgacttagttacgcgt
agtgaagcacagttattacgcacccctaatttagggaggaagtcattagcagaaataaaa
aatattctagcagatcaaggtttatcattaggcttacatgttgaaggctgggaatctcct
gatcaaagtaaagtatag
DBGET
integrated database retrieval system
