Candidatus Comchoanobacter bicostacola: MMH89_03660
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Entry
MMH89_03660 CDS
T08376
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Pathway
gbac03030
DNA replication
gbac03430
Mismatch repair
gbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMH89_03660 (dnaQ)
03430 Mismatch repair
MMH89_03660 (dnaQ)
03440 Homologous recombination
MMH89_03660 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbac03032
]
MMH89_03660 (dnaQ)
03400 DNA repair and recombination proteins [BR:
gbac03400
]
MMH89_03660 (dnaQ)
Enzymes [BR:
gbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMH89_03660 (dnaQ)
DNA replication proteins [BR:
gbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMH89_03660 (dnaQ)
DNA repair and recombination proteins [BR:
gbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMH89_03660 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UTC24317
UniProt:
A0ABY5DK06
LinkDB
All DBs
Position
complement(763049..763696)
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AA seq
215 aa
AA seq
DB search
MSRFIFADTETTGFDPKSERMLELALIEVVDRQQTGRVLHLYINPEQEVSAGAYRVHGIS
WNDVKDKPVFKSVAQEVIDFMQGGIFLAHNAPFDVGFFNMEFKRAGVDFMIGRDVDVVDT
LAIAKKMYPGQRNSLDALCTRLSIDRSHRKLHGALLDTELLVQVYLMMTSKQGRFNMKLN
KAVSQSSTAAQLPCLQVALSDEDKAAHEAYLETIG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggtttatatttgcagatacggaaacaactggttttgatcctaaaagtgagcgg
atgttagagctggctttgattgaggtagtcgatcgacagcaaacgggtcgggtattacat
ttatatatcaaccctgagcaggaagtatcagcaggtgcttatcgagtgcatgggatctcc
tggaatgatgttaaggataaacctgtgtttaaatcagttgcgcaagaagtgattgatttt
atgcagggtggtatatttttagcgcataatgcgccatttgatgttggattctttaacatg
gagtttaaaagagccggggttgactttatgattggtcgtgatgttgatgtagttgatacc
ttagcgattgcaaaaaaaatgtatcccggtcagcgtaatagtttggatgcattgtgtacg
cgtttatcgattgatcgatcacatcgtaagctacacggtgcactattggatacagagctt
ttggtacaggtttatttgatgatgaccagtaagcaggggcgattcaatatgaagctcaat
aaagcagtcagtcagtcttctactgcggctcaattaccttgtttgcaagtggctttgagt
gacgaagataaagcagcacatgaagcctacctagaaacaattggctaa
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