Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0207
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Entry
GbCGDNIH3_0207 CDS
T03155
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc03420
Nucleotide excision repair
gbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GbCGDNIH3_0207
03430 Mismatch repair
GbCGDNIH3_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbc03400
]
GbCGDNIH3_0207
Enzymes [BR:
gbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GbCGDNIH3_0207
DNA repair and recombination proteins [BR:
gbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GbCGDNIH3_0207
MMR (mismatch excision repair)
Other MMR factors
GbCGDNIH3_0207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_16
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AHJ61956
UniProt:
A0AAN0RBU5
LinkDB
All DBs
Position
240651..242939
Genome browser
AA seq
762 aa
AA seq
DB search
MTDHPSSPFPPAASVPSEGGEAYLARLNPEQRAAVETIDGPLLVLAGAGTGKTRVLTTRF
AHILKSGRAFPNQVLAVTFTNKAAREMRERVGAILGETVEGLWLGTFHALCARMLRRHAE
YVGLSSNFSILDSDDQMRLLKQVAETFRVDTKRWPLPGLMAAIQRWKDRGLTPERVTPAE
DTDYASGHAVAIYRAYQERLRTLNAADFGDLLLFMTEILRSRPEVLSQYHRAFRYILVDE
YQDTNLVQYLWLRLLAQGRQNGDQNICCVGDDDQSIYSWRGAEVENILRFEKDFPGAHVV
RLESNYRSTSPILGAAAGLIAHNEGRLGKTLRPGRTNAEGEKVDVISLWDSDEEARMVGD
RIETARRNRHPLSEIAVLVRAGFQTRSFEERLITLGVPYRVIGGLRFYERAEIRDAIAYA
RLLAQPSDDLAFERIVNVPRRGVGEVALRGLHERARADSVPLLEAASRQLADGKLRGKVK
EGIAAFLQGLESWRRMLGSEGHVATMATMLDESGYTEMWKQDKSPEAPGRLENLKELLRA
MAEFDALPGFLDHVSLVMENEQDAGDDKVSLMSLHAAKGLEFDMVFLPGWEEGLFPHQRA
LDEGGLKSLEEERRLAYVGLTRARQKAVISHAANRRIYANWQSAIPSRFIEELPPDCIQS
QGSAVMEREQRLRGGFGGGVQFPMLATRTGPRTAPWAAAPRVQEAWEQPGRASQAGRFSV
GSRVFHEKFGYGTVTAVIDDRLDVTFDKAGTKRILDSFVEPR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcatccttcatcgccgtttcctcctgctgcttctgtcccgtctgaggggggg
gaggcgtatctggcgcgcctgaacccggaacagcgggcggcggtggagacaattgatggg
ccgctgctggtgctggccggcgcaggcacgggcaagacacgggtgctgaccacccgcttt
gcccatatcctgaaaagcggacgtgcttttcccaatcaggttctggccgtcaccttcacc
aacaaggctgcccgggaaatgcgggagagggtcggggcgatcctcggcgagacggtggag
gggctgtggctcggcacattccatgcgctctgcgcccgtatgctgcggcggcatgcggag
tatgtcggcctgtcctcgaatttctcgattctcgacagtgatgaccagatgcgcctgctc
aagcaggtggcggagacgttccgggtcgataccaaacgatggccgctgcccggcctgatg
gccgccatccagcgctggaaagatcgcggcctgacgccggagcgtgtgaccccggctgag
gatacggattatgcctccggccatgctgtcgcgatctatcgggcctatcaggagcggctg
cggacactcaatgcggctgatttcggcgatctgctgctttttatgacggagattctccgc
tcccggccggaggtgctgagccagtatcatcgggctttccgttacattctggtcgatgag
tatcaggacacgaatctggtccagtatctctggctgcgtctgctggcgcagggacggcag
aacggggatcagaacatttgctgcgtcggggatgacgatcagagcatctattcctggcgc
ggtgcggaggtggaaaacatcctgcgcttcgaaaaggatttccccggcgctcatgtggtg
cggctggagagtaattatcgctcgacctcccccattctcggcgctgcggccgggctgatt
gcgcataatgaagggcggctcggcaaaacgctgcgtccgggccggaccaatgcggaaggt
gagaaggttgatgtcatctcgctgtgggattccgatgaggaggcccgcatggtgggggat
cgcatcgagacagcgcgtcgtaaccgtcaccctttgtcggagatcgcggtgctggtcagg
gccggctttcagacccgctccttcgaggaaaggctgattactctgggcgtgccctatcgt
gtcattggcgggttgaggttctatgagagggccgaaattcgggatgcgatcgcttatgcg
cggctgttggcccaaccttccgatgatctggcgttcgagcggatcgtgaatgtgccgcgt
cgtggcgtgggagaggtcgcgttgcgtggcctgcatgaacgggccagggctgattccgtc
ccgctgctggaagccgcttcacggcaattggccgatggtaaattgcgcgggaaagtgaaa
gagggcatcgctgccttcctgcaggggctggagagttggcggcgcatgctgggtagcgaa
ggccatgtcgccaccatggccaccatgctggatgagagcggctatacggagatgtggaag
caggacaaatcacccgaggcgccgggcaggctggaaaatctcaaggaattgctgcgcgcc
atggccgagttcgatgctctgcccggttttctcgatcacgtctcgctggtgatggagaat
gaacaggatgcgggcgacgacaaggtcagtctgatgagcctgcatgccgccaagggactg
gaattcgacatggttttcctgccgggttgggaggaaggcctgttccctcatcaacgggcg
ttggatgaaggtggcctgaaaagcctggaggaagagcggcggctggcttatgtgggcctt
acgcgcgcgcgacaaaaagccgtgatcagccacgccgccaaccggcgcatttacgccaac
tggcagagcgccattcccagccgctttatcgaggagctgccgccggactgcatccagtcg
caggggtcggcagtgatggagcgggagcagcggttgcggggtggattcggaggtggcgtt
cagttcccgatgctggcgacccgcaccggcccccgtactgccccctgggccgcagcacca
cgggtgcaggaagcatgggaacagcctggccgggcatctcaggcagggcggttttcggtc
ggcagccgggtttttcatgaaaaattcggctatggaacggtgacggcggtgattgatgac
cgtctggacgtgacattcgacaaggcaggcacgaaacgcattctcgacagtttcgtggaa
ccgcgatga
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