Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0522
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Entry
GbCGDNIH3_0522 CDS
T03155
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc00330
Arginine and proline metabolism
gbc00480
Glutathione metabolism
gbc01100
Metabolic pathways
gbc01110
Biosynthesis of secondary metabolites
Module
gbc_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
GbCGDNIH3_0522
09106 Metabolism of other amino acids
00480 Glutathione metabolism
GbCGDNIH3_0522
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
GbCGDNIH3_0522
Enzymes [BR:
gbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
GbCGDNIH3_0522
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHJ62296
UniProt:
A0AAN0VF46
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Position
598931..601285
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AA seq
784 aa
AA seq
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MEYGRRFKFLVCAPTFNPDDLEGIRLQQILEEIEQDGYFVLRARRDDDAELAIRTDAAIG
CVIVDWGKKGAAGKAAGLIELIRKRGLDVPIIVLVRRHRLEDIPVAVLDNIDSFIFLADE
TPDFIAKNLVARLRQYADTLKTPFFGQLVDYAEQGNMLWTCPGHNGGVFYRRSPIGRIFV
EHLGEAIFRDDLDNSVLQLGDLLTHEGPALKAQREAATIFGAERTYFVLNGTSTSNKIAL
NALLAEGDLVLFDRNNHKAAHHGALLLSGAVPVYIDTARNPHGMIGPMRRDALNEEALRE
AIRTHPLVRDPEAWRKPRPFRVAMIEQCTYDGTIHSAEEVLATIGHLCDYILFDEAWAGF
MKFHPLFRGRFGMGLPNLGENDPGIIVTQSTHKQLASFSQASQIHVKDSHLKGQDRQIGH
NRFNEMFLLHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTVRLGIELRKKIRLTRKEY
KQAQTSPDLQWFFEPFVPKRVQPSEKAEAFAGLRWEDAPTDLLASDPEQWMLRPGDDWHG
FPDLHPGWVMTDPNKLTLLTPGFDGRNEDNYADHGVPAPVVAEYLRQNRIVPEKNDLNSL
LFLLTPGIESSKAGTLLSYLVTFKNLHDQNVLLSDAIPDFVARRRERYKNVRLRDLCAEM
HAFYRDRQVSRLQAEQFMAQHLPEMAMLPHEAMRELVRNNVDYLPLEEAQGRIAATLWLV
YPPGIATIVPGERLGPNAEPMVAYLKAFEDAANQFPGFENEIQGLYRENKDGRIRFYTYF
VRER
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaatacggacgccgcttcaaatttctggtctgcgcaccgacctttaacccggacgat
ctggaaggtatccgccttcaacagattctggaggagatcgagcaggacggatatttcgtg
ctgcgcgcccgccgtgatgacgatgcggagctggccatccgtaccgacgctgccattggt
tgcgtcatcgttgactggggcaagaaaggggcagccggtaaggcggccgggctgattgaa
ctgatccgcaagcgcggtctggatgtgccgatcatcgtgctggttcgtcgccacaggctg
gaggacatcccggtcgctgtgctggacaatatcgacagtttcatctttctggcggacgaa
acgcctgactttatcgcgaaaaatcttgtcgcacgcctgcggcaatatgccgacacgctg
aagacgccttttttcggccagttggtcgactatgccgagcagggcaacatgttgtggacc
tgtccggggcataatggcggcgtgttctatcgtcgcagcccgatcggccgcattttcgtt
gagcatctgggcgaggcgatctttcgtgacgatctggacaattccgtgcttcagctgggc
gatctgttgacccatgaaggtccggccctgaaggcccagcgggaggccgccacgattttc
ggggccgagcggacgtatttcgtgctgaatggcacctcgacttccaacaagattgcgttg
aatgccctgttggcagaaggcgatctggtgctgttcgaccgcaacaaccacaaggcggcg
catcatggcgctttgctgctgagcggtgctgtgccggtttatatcgatacagcccgcaac
ccgcatggcatgatcggcccgatgcggcgggatgcgttgaatgaagaggcgctgagagaa
gcgatccggacccatccgctggtgcgcgatccggaagcgtggcgcaagcctcgcccgttc
cgcgtggcgatgatcgagcagtgcacctatgacggcactatccattcggctgaggaagtg
ctggcgacgatcggccatctgtgtgactatatcctgttcgatgaagcatgggccggtttc
atgaagttccacccgctgttccgggggcgcttcggcatgggactgcccaatctgggtgag
aacgatcccggtatcatcgtgacacagagcacgcacaagcagcttgcttctttctctcag
gcatcacagatccatgtgaaggacagtcatctgaaagggcaggaccgtcagatcggtcac
aaccgtttcaacgagatgttcctgctgcacgcctccaccagcccgttctatccgctgttc
gcctcccttgatgtcggtgcgcagatgatgaaaggccgctccggcgaggtattgtgggac
gatacggtccggttggggatcgaactgcgcaaaaagatccgtttgacgcggaaagaatac
aaacaggcgcagaccagtcccgatctgcagtggttttttgagccgttcgtccccaagcgt
gtgcagccctcggaaaaggcggaggccttcgccggattacgttgggaagatgcgccgacg
gatctgctggcttcggatccggaacagtggatgttgcgccccggtgatgactggcacggc
ttccctgacctgcatcctggctgggttatgaccgatccgaacaaactgaccttgctgaca
cccggttttgatggacgcaacgaggacaactacgccgatcatggcgtgccggcgccggtg
gtggcggaatatctgcgtcagaaccgcatcgtgccggaaaagaacgatctgaactctctg
ctgtttcttctgacgcccggtattgaaagcagtaaggcgggaacgttgttatcctatctt
gtcacgttcaaaaacctgcatgatcagaacgtgctgctgtccgacgccattccggatttc
gtggcgcgtcgacgggagcgctataagaacgtgcgtttgcgtgatctctgcgcggaaatg
cacgctttctatcgagaccggcaggtcagccggttacaggcagaacagttcatggcccag
cacctgcccgagatggccatgctgccgcacgaggccatgcgcgaactggtgcgcaacaat
gtcgattacctgcccctggaagaagcgcagggaagaatcgccgcgacattgtggctggtt
tatccgccgggtatcgcgaccatcgttcccggtgaaaggctcggtcccaatgcggagcct
atggtcgcctatctgaaagcttttgaagatgcggcaaatcagttccccggatttgaaaat
gagattcagggcttatatcgagaaaataaagacggcaggattcgtttttatacgtatttt
gtaagggagcgctga
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