Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0527
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Entry
GbCGDNIH3_0527 CDS
T03155
Name
(GenBank) Efflux protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GbCGDNIH3_0527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbc02000
]
GbCGDNIH3_0527
Transporters [BR:
gbc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GbCGDNIH3_0527
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_11
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AHJ62302
UniProt:
A0AAN0RCJ9
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All DBs
Position
604957..606153
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AA seq
398 aa
AA seq
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MAGHKTGSSLPGRRMALAWAASLLTGAHNAWGREEGHSGIRHALPRTPSAPAAVAPDATA
SLLHRVVMGCSGEDYASAVQAVAGQRLGHLQTRLVVDVTDTLPRMESIRQARILARPAPC
DVLLLDDIAMYTLSLIQPFRPATPQFLPALIGVEPDLRLPYAAPQMQSGLVIVRRASLTK
DMVLLRYGDLASPRLHGRVGFSDAQYLQVMGAATLAMGGSMTYYAPGLTWLRRLRHHGAR
SYPSDEALGNALRTGEIVAALTLQANAVIWQQMVGDLAWHAAEEGVIPVIMQAAMLRDDA
DPAAAALACNMLLEPAVQTDLMHRTGFLPTVTSLLEDHETIRAYGFSTYQRDRFQWPAYS
YLAGEMMALWKQWIAIFDARPVRSAHRPAGHPKPVTRP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcataagaccggatcatctctgccggggcgtcggatggcgcttgcgtgggcg
gcatccctgttgacgggtgctcacaatgcatgggggcgggaggaagggcattccggtatt
cggcatgctcttccccggacaccttctgccccggctgctgttgcgcctgatgcgaccgcc
agcctgctgcaccgtgtggtcatgggatgcagcggtgaggattatgccagcgccgttcag
gcagtggcagggcagaggctggggcatcttcagacgaggctggtggtcgatgtcaccgat
acgttgccgaggatggaaagtattcggcaggcccgcattctggcacggccggcgccttgc
gatgtgctgctgctggacgacatcgccatgtataccctgtccctgatccagccctttcgc
cccgccacaccgcaatttcttccggctctgatcggtgtcgaaccggatctgcggctgccc
tatgctgctccgcagatgcagagcggtctggtcatcgtccgccgtgcgtccctgacaaag
gacatggtgctgttgcgctatggtgatctggcttcaccgcggctgcatgggcgggtcgga
ttttcggatgcgcagtatcttcaggtcatgggcgctgccaccttggccatgggtgggagc
atgacatattacgcacccggtctgacctggctgcgccgcctgcgtcaccatggagcgcgg
agctatccgagcgatgaagcattgggcaatgccctccgtaccggagagatcgttgccgcc
ctgaccttgcaggccaatgcagtgatctggcagcagatggtaggcgacctggcctggcat
gcggcagaggagggggtcattcccgttatcatgcaggcagccatgctgcgcgatgatgcc
gatcctgccgctgccgccctggcctgtaatatgctgttggagccggcggtgcagaccgat
ctgatgcaccgtaccggttttctgccgaccgtaacctccctgctggaggatcacgaaacg
atccgggcttatggtttttccacctatcaacgggaccggttccagtggccggcttattcg
tatctggcaggggagatgatggcgctgtggaaacaatggattgccatttttgatgcccgg
cccgtgcgttcggcccaccgtccggcggggcatccgaaaccggtgaccagaccgtga
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