Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0690
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Entry
GbCGDNIH3_0690 CDS
T03155
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbc03016
]
GbCGDNIH3_0690
Enzymes [BR:
gbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GbCGDNIH3_0690
Transfer RNA biogenesis [BR:
gbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GbCGDNIH3_0690
Prokaryotic type
GbCGDNIH3_0690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHJ62475
UniProt:
A0AAN0RCX8
LinkDB
All DBs
Position
complement(784704..785624)
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AA seq
306 aa
AA seq
DB search
MVHFAWTRCRNRAARHWMPPRSCGAISCRQAPGWMSMGFPDPQPGWTRYALRIEYDGTPF
IGWQRQGTDDSATAQGRAVSVQWVLEQAAARLARGEAVSSIVAGRTDAGVHAQAQVAQID
LPTPFHPERVREALNFHMKPYPVAVLEAAYAPDGWNARFSAIGRSYRYLILNRRARPALM
EGRVWHVAQPLDADAMDGAAKHLLGRHDFTSFRAAACQAKSPLRTLDRLDVRRDGDLITI
IAEARSFLHHQVRNMVGTLKLVGDGRWTAEHVAAALAARDRAKAGPTAPPDGLALTGVIY
EQDPFL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactttgcttggacaaggtgcagaaaccgggccgcccggcactggatgccgccg
cgttcctgcggggccataagctgccggcaggcaccaggctggatgagcatgggttttcct
gacccccaacccggctggacccgttacgcgctgcggatcgagtatgacggcacccccttt
atcggctggcagcgacagggtacggatgacagcgcaacggctcaggggcgggctgtttcc
gtgcaatgggtgctggaacaggccgctgccagactggcgcggggagaggccgtttccagt
attgtggcgggccgcaccgatgcgggggtgcatgcgcaggctcaggttgcgcagatcgac
cttcccacccccttccaccctgagcgcgtgcgggaagccctgaacttccacatgaagcct
tatccggtagcggttctggaggctgcctacgcaccggacggctggaatgcccgtttttca
gcgattggccggtcctatcgttatttgattctcaaccgtcgtgcgcggcctgccctgatg
gaagggcgcgtctggcatgttgcccagccgctggatgccgatgccatggatggagcggcc
aagcatctgctgggacgtcacgatttcacctcgttccgtgccgcagcctgtcaggccaaa
agcccgctgcgtacactggaccggctggatgtgcgccgggatggtgatctcatcacgatc
atcgcagaagcccgcagctttttgcatcatcaggtacgcaacatggtgggaacgttgaaa
ctggtcggcgatggacgctggacagcagagcatgttgccgccgcgctcgccgcgcgtgac
cgcgccaaagccggaccaaccgcaccaccggacgggctggccctgaccggagtgatttat
gaacaggatccgtttctgtaa
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integrated database retrieval system
