Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0849
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Entry
GbCGDNIH3_0849 CDS
T03155
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gbc03009
]
GbCGDNIH3_0849
Enzymes [BR:
gbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GbCGDNIH3_0849
Ribosome biogenesis [BR:
gbc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GbCGDNIH3_0849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHJ62674
UniProt:
A0AAN0VFG0
LinkDB
All DBs
Position
complement(1012192..1013184)
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AA seq
330 aa
AA seq
DB search
MPATPNDSSQAEITVFAPSDAAPERIDRFLAIHLPDMSRSRLKSLIESGAVHRDGQSVRG
PAEMVRPGSLYRLRLPTPAPAIPIAQHIAFPILFEDDDLIVLDKPAGMVVHPAPGSPDGT
LVNALLAYCGENLPGIGGEKRPGIVHRLDKDTSGVMVVAKTEFALAALSALFAARDLERL
YTALAWGVLTPREGDIEGAIGRDPRDRKRMAIVRHGGKPALTHYRAMATWYDAVTRMECK
LATGRTHQIRVHLSANGHPIIGDPVYLRRIPAVAKSLDQDVKNALLDFPRQALHAGVLGF
RHPRTGENLRFETPLPEDMMSLIDLLDHNS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaccccgaacgattcaagccaagcagaaataacggtctttgcgccctccgat
gcagcgccggagcggatcgaccgctttctggccatccatctgcccgatatgagccgctcc
cggctgaaatcactgatcgagagcggcgcggtccaccgtgatgggcaaagtgtccgtgga
ccggcagagatggttcgtcccggcagcctgtaccggctgcgtctgcccacacctgctccg
gccattcccattgctcaacacatcgccttcccgatcctgttcgaggatgacgatctgatt
gtgctcgacaaaccggctggcatggtagtgcatccggcccccggcagtccagacggcacg
ctggtcaatgcgctgctggcctattgcggggagaacctgccaggaatcggcggagaaaag
cgccccggcattgtgcatcgtctggataaagatacctccggcgtcatggttgttgccaag
acagagtttgctctggcagccctttcagccctgtttgcggcacgtgatctggaaaggctg
tataccgcgctcgcatggggtgtccttacgccccgagaaggcgatattgaaggtgccatc
gggcgcgacccaagagatcgcaagcgcatggccattgtccgtcatggcggcaaacccgca
ctgacccattaccgcgccatggcaacatggtatgacgctgtcacacggatggaatgcaag
cttgcaaccgggcgcactcatcaaatccgcgtgcatctctccgcaaacggacatcccatc
atcggtgatccggtctatctgcgccgcattccagccgtcgcaaagagtctggatcaggat
gtcaaaaacgctttgctcgactttccccgccaggccctccatgccggcgtgctggggttc
agacacccacgaaccggtgaaaatctgcgtttcgagaccccattgccggaagatatgatg
agcctcatcgatttactcgatcataattcatag
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