Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0869
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Entry
GbCGDNIH3_0869 CDS
T03155
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gbc
Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbc03400
]
GbCGDNIH3_0869
DNA repair and recombination proteins [BR:
gbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GbCGDNIH3_0869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
AAA_10
AAA_30
TrwB_AAD_bind
T2SSE
DUF5852
AAA
AAA_16
DUF478
Zeta_toxin
AAA_19
nSTAND_NTPase5
AAA_18
CbiA
AAA_7
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AHJ62693
UniProt:
A0AAN0RD34
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All DBs
Position
1032472..1034142
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AA seq
556 aa
AA seq
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MTETPILVGAGEHEARLLPAFANRHGLIAGATGTGKTITLQVLAESLSAAGVPVLCTDVK
GDLAGLSQPGAPNPKLEQRAARLGVHDYSYRAAPVVFWDVFGVSGHKVRATVAEMGPILL
SRMLELNDTQEGVLSIAFAVADDEGLLLLDYKDLRAVLSHVAERAGELGTEYGNVSKATI
GTIQRRLLRLEQEGGEAFFGEPALELADLLLITPDGRGAVNILAADRLIHSPRLYATVLL
WLLSTLYETLPEVGDLERPKLVFFFDEAHLLFDDAPKALVDKVTQVARLIRSKGVGVYFV
TQNPLDIPASVLGQLGNRVQHALRAFTPADQKAVRAAADTFRQNPRLNTEEAIGSLAVGE
ALVSFLDESGSPSVVQKVQIVPPRSRIGAITAEERAEIIRKSPVGTKYDASIDRISAYER
LSGRATSSQQETGSVSPAPVEPGGDPWGTAMGPAPLPPSSGQGSVWNSNGWQGGLADSAP
YPPQEPVSRPAPREVRTPSRNGEGGGWLGDVLGSHGGRQGLGEAFAKSVIRSLGSQVGTK
VGGEVLRGILGSILKR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacccccattctggtcggcgctggtgagcatgaagcacgtctgctgcccgct
tttgccaaccggcatggcctgattgcaggggcgaccggcaccggcaagacaatcactctt
caggtgctggcggaatccctgtccgctgccggggtgccggtcttgtgtaccgatgtgaaa
ggtgatctcgcggggttgtcacaaccgggcgcccccaatccgaaactggaacagcgtgcg
gcgcggttaggcgttcatgattacagctatcgtgccgcgcctgtcgtattctgggacgta
ttcggggtttccggccacaaggtgcgggccacagtggcggagatggggccgatcctgctt
tcacgcatgctggagttgaatgacacacaggaaggtgttctctccatcgcctttgcggta
gcggatgatgaaggcctcctgctgcttgattacaaggatttgcgggctgttctctcgcac
gtggccgagcgggccggggagctgggcacagaatacggcaatgtcagcaaggccacgatc
ggtacgatccagcgccgcctgctgagactggaacaggaaggcggagaagcctttttcggt
gaaccggcgctggaactggctgatttactgctgatcacgccggatggacgaggagcagtg
aacatcctggcggcggatcggctgattcacagcccgcgcctgtatgcgactgtgctgctc
tggctgctgtccactttatacgagaccttgccggaagtgggtgatctggagcgccccaaa
ctggtgtttttcttcgatgaggcacatctgctgtttgatgatgcccccaaggcgctggtg
gacaaggtgacgcaggttgcgcgtctgatccgttccaagggagtcggagtttatttcgtg
acacaaaatccgctggatattcctgcctctgtgctgggacagctcggtaatcgtgtgcag
catgcgctgcgcgcttttacaccagcggaccagaaagcagtccgcgcggcggcggacacg
ttccgccagaatccgaggctgaataccgaggaggcgatcggatcacttgcagtcggtgaa
gcgctggtttctttccttgacgagagcggatcaccctctgtcgtgcagaaggttcagatc
gtgccgccccgctcccgtataggggcgattacggcggaggaacgggcagagatcatccgc
aaaagtccggtcggtacgaaatacgatgcatcgattgaccggatcagcgcttatgagcgc
ctttccgggcgcgcgacttccagccagcaagagaccggctctgtttctcctgcgccggtc
gagccgggcggtgacccttggggcacagcgatgggaccggcacctttgccgccatcatcc
ggacaaggatcggtctggaacagcaatggttggcagggtgggctggccgattcagcccct
tatcctccgcaagagccggtttcccgccccgccccgcgtgaagtccggaccccgtcccgg
aacggggaaggcggcgggtggctcggcgatgtgctcggcagccatggtgggcgtcagggg
ctgggtgaggcgtttgccaaatccgtcatccgcagcctgggcagtcaggtcggtaccaag
gttggtggggaagttctgcgtggtattctcggatctattctgaaacgctga
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