Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1008
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Entry
GbCGDNIH3_1008 CDS
T03155
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc00260
Glycine, serine and threonine metabolism
gbc00460
Cyanoamino acid metabolism
gbc00630
Glyoxylate and dicarboxylate metabolism
gbc00670
One carbon pool by folate
gbc00680
Methane metabolism
gbc01100
Metabolic pathways
gbc01110
Biosynthesis of secondary metabolites
gbc01120
Microbial metabolism in diverse environments
gbc01200
Carbon metabolism
gbc01230
Biosynthesis of amino acids
gbc01240
Biosynthesis of cofactors
gbc04981
Folate transport and metabolism
Module
gbc_M00140
C1-unit interconversion, prokaryotes
gbc_M00346
Formaldehyde assimilation, serine pathway
gbc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH3_1008
09102 Energy metabolism
00680 Methane metabolism
GbCGDNIH3_1008
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GbCGDNIH3_1008
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GbCGDNIH3_1008
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GbCGDNIH3_1008
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GbCGDNIH3_1008
Enzymes [BR:
gbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GbCGDNIH3_1008
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHJ62843
UniProt:
A0AAN0RDN1
LinkDB
All DBs
Position
complement(1178694..1179998)
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AA seq
434 aa
AA seq
DB search
MNTMSASALDAFFGARLADTDPDLFAALEKEFHRQEDGIELIASENIVSAAVLEAQGSVL
TNKYAEGYPGKRYYGGCAAVDIAEQLAIDRAKQLFGCEFANVQPHSGAQANGAVFFALAK
PGDTILGMSLAAGGHLTHGAAPTVSGKWFNAVQYGVRKEDGLLDYEELEALAREHKPKII
IAGGSAYPRFIDFPRIRKVADEVGAYFMVDMAHFAGLVAAGIYPSPLPHAHVVTTTTHKT
LRGPRGGMILTNDLELGKKFNTAVFPGLQGGPLMHVIAAKAVAFGEALKPDFKTYQQSVA
NNAKVLASTLVERGLAIVSGGTDTHLMLVDLRPKNVTGKATDESLGRAHITTNKNAIPFD
PQKPAVTSGIRLGTPAGTSRGFGEAEFREIGLMIDRVVEGLSKAGENGSNEAVEQEVGAE
VKALCKRFPLYRNH
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatgtccgcatccgcccttgatgcctttttcggcgcacgcctcgccgatact
gatcccgacctgttcgcggcccttgaaaaagaatttcaccgtcaggaagacggtatcgaa
ctgatcgccagcgaaaacatcgtttctgcggcggttctggaagctcagggttccgtcctg
accaataaatatgccgagggttatcccggcaagcgctactacggtggttgcgcggcggtc
gacatcgccgagcagctcgctattgaccgcgccaagcagctgttcggctgcgaattcgcc
aacgtgcagccgcattccggcgcacaggccaatggcgcggtgttcttcgcactggccaag
ccgggcgacaccattctgggcatgagcctcgccgctggcggccatttgacccatggtgcg
gcccccactgtcagcggcaagtggttcaacgcagtgcagtacggcgtccgcaaggaagac
ggcctgctggattatgaggagctggaagccctcgcccgtgagcacaagccgaagatcatc
atcgccggtggttccgcctatccgcgcttcatcgacttcccccgcatccggaaggtcgca
gatgaagtcggcgcgtatttcatggtcgacatggcgcattttgccggtctggtcgcagcc
ggcatctatccgtccccgctgccgcatgcgcatgtggtcaccaccaccacccataagacc
ctgcgtggcccgcgtggcggcatgatcctcaccaatgaccttgagctgggcaagaaattc
aacaccgccgtgttccccggtctgcaaggtggcccgctgatgcatgtcatcgctgccaag
gccgttgccttcggggaagccctgaagccggacttcaagacctatcagcaatccgttgcc
aacaatgcgaaggttctggcttctacgctggtggaacgcggtttggccatcgtgtccggc
ggcaccgacacccatctgatgctggtcgatctgcgtccgaagaatgtgaccggcaaagcc
actgatgagagcctcggtcgcgcccatatcaccaccaacaagaacgccattccgttcgac
ccgcagaagcccgccgtgacctccggcattcgtctcggcacgccggccggcacgtcccgc
ggctttggcgaggctgaattccgcgagatcgggctgatgatcgaccgcgtggtggaaggc
ttgtcaaaggctggcgaaaacggctccaacgaagccgtcgagcaggaagtcggcgccgag
gtcaaggcgctctgcaagcgtttcccgctctatcgcaatcactga
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