KEGG   Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1008
Entry
GbCGDNIH3_1008    CDS       T03155                                 
Name
(GenBank) Serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
gbc  Granulibacter bethesdensis NIH3.1
Pathway
gbc00260  Glycine, serine and threonine metabolism
gbc00460  Cyanoamino acid metabolism
gbc00630  Glyoxylate and dicarboxylate metabolism
gbc00670  One carbon pool by folate
gbc00680  Methane metabolism
gbc01100  Metabolic pathways
gbc01110  Biosynthesis of secondary metabolites
gbc01120  Microbial metabolism in diverse environments
gbc01200  Carbon metabolism
gbc01230  Biosynthesis of amino acids
gbc01240  Biosynthesis of cofactors
gbc04981  Folate transport and metabolism
Module
gbc_M00140  C1-unit interconversion, prokaryotes
gbc_M00346  Formaldehyde assimilation, serine pathway
gbc_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:gbc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    GbCGDNIH3_1008
  09102 Energy metabolism
   00680 Methane metabolism
    GbCGDNIH3_1008
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GbCGDNIH3_1008
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    GbCGDNIH3_1008
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    GbCGDNIH3_1008
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    GbCGDNIH3_1008
Enzymes [BR:gbc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     GbCGDNIH3_1008
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AHJ62843
UniProt: A0AAN0RDN1
LinkDB
Position
complement(1178694..1179998)
AA seq 434 aa
MNTMSASALDAFFGARLADTDPDLFAALEKEFHRQEDGIELIASENIVSAAVLEAQGSVL
TNKYAEGYPGKRYYGGCAAVDIAEQLAIDRAKQLFGCEFANVQPHSGAQANGAVFFALAK
PGDTILGMSLAAGGHLTHGAAPTVSGKWFNAVQYGVRKEDGLLDYEELEALAREHKPKII
IAGGSAYPRFIDFPRIRKVADEVGAYFMVDMAHFAGLVAAGIYPSPLPHAHVVTTTTHKT
LRGPRGGMILTNDLELGKKFNTAVFPGLQGGPLMHVIAAKAVAFGEALKPDFKTYQQSVA
NNAKVLASTLVERGLAIVSGGTDTHLMLVDLRPKNVTGKATDESLGRAHITTNKNAIPFD
PQKPAVTSGIRLGTPAGTSRGFGEAEFREIGLMIDRVVEGLSKAGENGSNEAVEQEVGAE
VKALCKRFPLYRNH
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgaatacaatgtccgcatccgcccttgatgcctttttcggcgcacgcctcgccgatact
gatcccgacctgttcgcggcccttgaaaaagaatttcaccgtcaggaagacggtatcgaa
ctgatcgccagcgaaaacatcgtttctgcggcggttctggaagctcagggttccgtcctg
accaataaatatgccgagggttatcccggcaagcgctactacggtggttgcgcggcggtc
gacatcgccgagcagctcgctattgaccgcgccaagcagctgttcggctgcgaattcgcc
aacgtgcagccgcattccggcgcacaggccaatggcgcggtgttcttcgcactggccaag
ccgggcgacaccattctgggcatgagcctcgccgctggcggccatttgacccatggtgcg
gcccccactgtcagcggcaagtggttcaacgcagtgcagtacggcgtccgcaaggaagac
ggcctgctggattatgaggagctggaagccctcgcccgtgagcacaagccgaagatcatc
atcgccggtggttccgcctatccgcgcttcatcgacttcccccgcatccggaaggtcgca
gatgaagtcggcgcgtatttcatggtcgacatggcgcattttgccggtctggtcgcagcc
ggcatctatccgtccccgctgccgcatgcgcatgtggtcaccaccaccacccataagacc
ctgcgtggcccgcgtggcggcatgatcctcaccaatgaccttgagctgggcaagaaattc
aacaccgccgtgttccccggtctgcaaggtggcccgctgatgcatgtcatcgctgccaag
gccgttgccttcggggaagccctgaagccggacttcaagacctatcagcaatccgttgcc
aacaatgcgaaggttctggcttctacgctggtggaacgcggtttggccatcgtgtccggc
ggcaccgacacccatctgatgctggtcgatctgcgtccgaagaatgtgaccggcaaagcc
actgatgagagcctcggtcgcgcccatatcaccaccaacaagaacgccattccgttcgac
ccgcagaagcccgccgtgacctccggcattcgtctcggcacgccggccggcacgtcccgc
ggctttggcgaggctgaattccgcgagatcgggctgatgatcgaccgcgtggtggaaggc
ttgtcaaaggctggcgaaaacggctccaacgaagccgtcgagcaggaagtcggcgccgag
gtcaaggcgctctgcaagcgtttcccgctctatcgcaatcactga

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