Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1194
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Entry
GbCGDNIH3_1194 CDS
T03155
Name
(GenBank) Soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbc01011
]
GbCGDNIH3_1194
Enzymes [BR:
gbc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GbCGDNIH3_1194
Peptidoglycan biosynthesis and degradation proteins [BR:
gbc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GbCGDNIH3_1194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_19
Phage_lysozyme2
SLT_4
Motif
Other DBs
NCBI-ProteinID:
AHJ62994
UniProt:
A0AAN0RDP3
LinkDB
All DBs
Position
complement(1323507..1325627)
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AA seq
706 aa
AA seq
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MLHSPAMLSTLISSRMIVNTMIPSLLRIRQGVTLWATLLAVIAQTGCSTRPHDGSITSQV
TDNSVKKSFPTASTNTIGALIRADQWDQAMAEASALPDPVAVKLVTFYRALAPGAMSAPD
IAAFMAANPGWPMQSTLARRRDQAIVAEQDNAKAASLCDSLHPALVDAQIRCAEAWSATG
ATSTALDQIRTLWAEGKGNQTQETLIRQKWSQALTAETRKARYQALLLTNMEAAFRQIPY
LPASDRASATALAALWRKEPTALSLFNALSGEAKSSPVMVLASARYLRLTDHDQDAASVW
KQDGDTAEQAESAAHNAAFRQERTILARALLKDGGQDNARLAFEVITGGSASTPVQKAES
EFLAGFIALRFLRDPAAAENRFRSLLSSGNAVLTLSRAHYWLGEVAQARGDEATAKAEWL
QAAAWPVTFYGQLGALQAGESPSSLGRRIRSLNDPGWSSAQLESYSGQELVRAALLLISW
EESRRARAFLLQADEAEAGRQLPAGTVHALTAHLAVQAGLPDVAVFVARRMGRDGAMLPV
TGWPPDAPVEQSATPVPLTLGIIRQESSFDPQAESPAGARGLMQLMPATASQVARTLGIT
VSSAQLLSDPALNVRLGSTYLQGLLDRFGQAVPLAVAGYNAGPHRVDAWRIDYASLQNAI
DWIELIPFNETRNYVQRVIENTMVYRAKRNDSLTEPPLLSAPALAH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctacactcccctgcaatgctttccaccctcatctccagccgcatgattgtgaacacg
atgatcccttccctgttgcgtatccgccagggggtaaccctttgggcaactcttctggca
gtcattgcccagacgggatgctccacacggccacatgatggcagcattacttcacaagtt
actgataatagtgtaaaaaaatcttttccaacagcctcaacaaacacgatcggtgccctg
atccgtgccgatcaatgggaccaggccatggctgaggcatcggcactccctgatccggtc
gcggtcaagctggtcacattttatcgggcattggcgcccggagcgatgtccgccccggat
attgccgccttcatggcagccaatccgggctggccgatgcaatcgactctggcgcgccgc
cgcgatcaggccattgtggcagaacaggataatgccaaagcggcttctctctgcgactcg
ctgcatcctgctctggtcgatgcgcagattcgctgtgccgaggcatggagcgcaaccgga
gcaaccagcactgctctggaccagatcagaacactgtgggccgagggcaaaggcaatcag
acgcaggagactttgatacggcaaaaatggagtcaggccttaacggcagagacccggaaa
gcccgctatcaggcccttctgctgaccaatatggaggcggctttccgccagattccatat
ttgcccgcctctgatcgtgccagtgccacggccctcgctgcgctgtggcgcaaggaacca
accgctctatcgttgtttaacgccctgtcaggagaggcgaaatcctcacccgtgatggtg
ctggccagcgcgcgctatctgcgcctgaccgatcatgatcaggatgcggcctcagtctgg
aaacaggatggtgacaccgcagaacaggcggaatccgctgctcataacgccgccttccgg
caggaacgcacaatcctcgcccgcgccttgctgaaagatggcggccaagacaatgcccgg
ctggctttcgaggtcatcacgggggggagtgcctcaacccctgtacaaaaggcagaaagc
gagtttttagctggttttatcgcgctccgttttctgcgtgatcctgctgctgcggaaaat
cgttttcgttcattgctttcctcaggcaacgccgtgctgaccttgtccagggcacattac
tggctcggggaggttgcacaggcccgtggtgatgaggcaacggcaaaggctgagtggctt
caggcggcagcatggcctgtcacgttctatgggcagcttggagccttgcaggctggagaa
tctccatccagcctggggcggcgtatccgctctctaaacgatccgggctggagcagtgcg
caactggaatcctattccgggcaggagttggtcagagccgccctgctgctgatttcatgg
gaagagagccgccgggcacgtgctttcctgttgcaggcggatgaggccgaggctggtcgt
caactgcctgccggaacagtccatgcgctgacggcacatctggcggtacaggctggtttg
ccggatgtcgcggtctttgtggcccgccggatgggccgtgatggggcgatgctgcccgtt
accggctggccgccggatgcacctgtcgaacaaagtgcaaccccggtgccactgacactg
gggattattcgtcaggaaagcagcttcgacccgcaggcggaaagccctgccggagcacgt
ggcttgatgcagttgatgcctgccaccgctagtcaggttgcccgaaccttgggcatcacc
gtctcatccgctcagcttctcagtgatccagcgctgaatgtccggctgggcagcacctat
ctgcaagggctgctggatcgctttgggcaagccgtgccactggccgtcgccggatataat
gccggtccgcatcgggtcgatgcatggcgcatagattacgccagcctccagaacgcgatc
gactggatcgagttaattccgttcaacgaaacgcgcaactatgttcagagagtgattgaa
aatacaatggtttatcgtgcgaaacgcaatgattcattgacggagccgcccttattatcc
gctcctgctttggcgcattga
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