Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1219
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Entry
GbCGDNIH3_1219 CDS
T03155
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbc03032
]
GbCGDNIH3_1219
03400 DNA repair and recombination proteins [BR:
gbc03400
]
GbCGDNIH3_1219
Enzymes [BR:
gbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GbCGDNIH3_1219
DNA replication proteins [BR:
gbc03032
]
Prokaryotic type
DNA Topoisomerases
GbCGDNIH3_1219
DNA repair and recombination proteins [BR:
gbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GbCGDNIH3_1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHJ63020
UniProt:
A0AAN0VFQ9
LinkDB
All DBs
Position
complement(1348456..1351278)
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AA seq
940 aa
AA seq
DB search
MSDHTNPPSAPPDDDPNGGSLLMPVTLEEEMSRSYLDYAMSVIVSRALPDARDGLKPVHR
RILYGMQESGYTADKPYRKSARINGDVMGKYHPHGDAAIYDALVRLAQPFSLRVPLIDGQ
GNFGSMDGDPAAAPRYTEARLARSASFLLNDIDRDTVDFQPNYDDSEMEPRVLPASYPNL
LVNGADGIAVGMATKIPTHNPTEVIDATLAMIDNPDITLDELMTVIPGPDFPTGGLILGR
SGIRSAFETGKGSITVRARTDFEEVRGGRQAIVISEIPYQVNKATLQERMAELVRAKQIE
GISDIRDESDRSGVRVVIELKRDATPDVVLNHLFRFTQLQISYGINMLALDGGQPRLMGL
RDVLSTFIRFREDVILRRARFELNKARDRAHLLVGLAIAVANIDEVIRLIRQSPDSTSAR
IALMERDWPAADVAPLLTLIDDGGNVLTEAQTVRLTEVQARGILELRLQRLTGLERDKIH
NEMQEVAARIGELLEIIGSHIRRMEVMREELAVIRAELNSPRRSEINDSLADQDDESLIE
PGQMVVTITRDGFIKRTPLDVFRQQHRGGRGRAAASMRGDDIVTRSFNAHTHQWVLFFSS
GGKAYRQKVWRLPEAGPTAKGRALVNLLPELGSDGITAVLPLPQDESLWEGLHLVFATAS
GGIRRNRLSDFKNVRASGLIAMKLDEGDRLIGVATCREGDDIMLASRLGRCIRFQANEDT
LRVFAGRESSGVRGMKLAQGDEVISLSVLRHVEATPEERAAYLRYASARRRSAAGEEDQI
DAEVMEADDSEVTADDTALSPERIAGLEEAEEFLLTVTIAGFGKRSSAYDYRVSGRGGQG
IANINLAPRNGRAVAATFPVRPGDDVMLVTDAGRLIRVPADQVRITGRSTMGVTLFRVDK
DEVVTSVFPVLETESVDDNGDDADSVAPAAPDGQVADSDD
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgatcataccaatcccccgtctgcaccgccggatgacgatccgaacggcggctcc
ctgctgatgccggtcacgcttgaggaggagatgagccgctcctacctcgattacgcaatg
tccgtcattgtcagccgtgcgctgcccgatgcgcgggatggtctgaagccggtgcatcgg
cgcatcctctacgggatgcaggaaagcggctatacggcggataaaccctatcgcaaatcc
gcccgcatcaatggtgacgtgatgggtaaataccatccgcacggtgatgccgcgatttat
gatgcgctggtgcgattggctcagcctttctccctgcgggtgcccctgattgatggtcag
ggcaatttcggttccatggacggcgatccggctgctgcgccgcgttataccgaggcgcgt
ctggcccgctccgccagcttcctgctgaacgatattgaccgcgatacagtcgatttccag
ccgaactatgacgatagcgagatggaaccccgcgttctgcccgcttcctatcccaatctt
ctggtcaacggggcggatggcatcgcggtcggcatggcgaccaagatccctactcacaac
ccgactgaagtcatcgacgccactctggcaatgatcgacaatccggacatcactcttgat
gaattgatgaccgtgattcccggtccggattttccgacaggcggcctgattctcgggcgt
tccggcatccgctcggcttttgagaccgggaaaggcagtatcaccgtccgcgcccgcact
gatttcgaggaagtgcgcggcggccgtcaggccatcgtgatctccgaaattccctatcag
gtgaacaaggccaccctgcaggagcgcatggccgagctggtgcgtgccaagcagattgag
ggcatcagcgatatccgtgacgaaagcgatcgctccggcgtgcgtgtggtgatcgaattg
aagcgcgatgccacgccggatgtggtgctgaaccatctgttccgctttacccagctgcag
atcagctatggcatcaatatgttggccctggatggcgggcaaccccgcctgatggggctg
cgggatgtgctgtctacattcattcgtttccgcgaggatgtcatccttcgccgggcgagg
tttgagctgaacaaggcacgtgatcgcgcgcatctgctggtcggtctggcgattgctgtg
gccaatatcgacgaggtgatccgcctgattcgtcagagtccggacagcaccagcgcccgt
atcgccttgatggaacgcgattggccggccgccgatgtggcaccgctgctcacgctgatc
gatgatggcggcaatgtgctgaccgaagcgcagacagtgcgactgacggaagtgcaggcc
cgcggcattctggaactgcgtctgcaacgcctgaccgggcttgagcgcgacaagatccac
aatgagatgcaggaagtcgccgcccgtattggcgagcttctggaaatcatcggcagccat
atccgccgcatggaagtcatgcgggaagaactggcggtgatccgggccgagctgaactct
ccgcgtcgcagcgaaatcaatgacagccttgccgatcaggatgatgaaagtctgatcgaa
ccgggtcagatggtagtaaccatcacccgagacggtttcatcaagcgtacgccgctggat
gtgttccgtcagcagcatcgcggtggacggggccgtgcggctgccagcatgcgtggcgat
gatatcgtgacccgcagctttaacgcacacactcatcaatgggtgctgttcttctcctcc
ggcggcaaggcgtatcgccagaaagtctggcgcctgcccgaagccggcccgacagccaag
ggcagggcgctggtcaatctgctgccggaactgggcagtgacgggattaccgccgtgctt
ccgctgccgcaggatgagtcgctgtgggaagggctgcatctggtgttcgccactgcttcc
ggtggtatccggcgcaatcggctctccgacttcaaaaatgtgcgggcctccggtcttatt
gcaatgaagctggatgaaggtgaccgcctgatcggcgtggctacctgtcgggagggggat
gacattatgctggcctcccgcctcggccgctgcatccgtttccaggcgaatgaggacacg
ctgcgcgtttttgccgggcgcgaaagctccggtgtccgcggcatgaaactggcgcaggga
gacgaggtcatcagcctgtccgtgctgcggcatgtggaggcaacgccggaagagcgagca
gcctatctgcgctatgcctccgcccgccgtcgcagtgctgctggagaagaggatcagatc
gatgccgaggtcatggaggcggatgattccgaggtcacggccgatgatacagccctttcg
ccggagcggatcgccgggctggaagaagccgaagaattcctgctcaccgtcaccattgcc
ggtttcggcaagcgatcttccgcctatgattatcgtgtgtctggccgtggtgggcagggg
attgccaatatcaatctcgctccccgcaatggtcgggccgtggcggcaactttcccggtc
aggccgggtgatgatgtaatgctggtcactgacgcgggtcgtttgattcgtgttcccgcc
gatcaggtgcggattaccggacgctctaccatgggcgttaccctgtttcgggtcgataag
gatgaggtcgtcaccagcgttttcccggtgctggagacagagtctgtcgatgataatggg
gatgatgccgattcagttgctccggcagcacctgatggacaggtggcagattcagatgac
tga
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