Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1628
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Entry
GbCGDNIH3_1628 CDS
T03155
Name
(GenBank) Transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GbCGDNIH3_1628
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbc02000
]
GbCGDNIH3_1628
Enzymes [BR:
gbc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GbCGDNIH3_1628
Transporters [BR:
gbc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GbCGDNIH3_1628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_21
RsgA_GTPase
DEAD
ABC_ATPase
APS_kinase
SbcC_Walker_B
AAA_30
DUF6391
Motif
Other DBs
NCBI-ProteinID:
AHJ63524
UniProt:
A0AAN0REP6
LinkDB
All DBs
Position
complement(1877757..1879652)
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AA seq
631 aa
AA seq
DB search
MDRYSPAGGVQTAPRPDTPGCMDARPLDQVTDQSPPPHAPPKRRGKGARKINVELEPTAL
AMMGRLWREHIAHHRVRMLVVILLTALMAGSTALYPVVIQHAIDLFNARDRRILYQIPVL
VLIVTAIKGAAMYGQTVSMQQLVLIVIRELQERMFSHLAHADLDRVEREAPAQLAARFTT
DAATIREALVRAVNGVGDVVTVVGLVSSMVYLDWVLSLIAAAMYPLAALPIQKIGKRIRR
ASGGMQERMGETAALLNESFAQARTIRAYRLEDFEIRRAGEAFQHLYSALLRMTRSRARV
DPVLEVLGGSAVAVVIGFTGWRAANGQSSLGDFAGFIAALLIASRPLRALGSLNAAVQEG
VAGLVRVFAVIDEPAAIRDAPGAVPLPQGQGHVAFENVGFVYADGRTGLDGLSFAAQPGM
TVALVGPSGAGKSTALALLPRLRDATSGRVLVDGADVREVTLASLRDAIAYVGQDALLFD
DTIAANIGIGREGAERAEIEQAAEAAAGGFIRDLPEGFETIVGPGGQRLSGGQRQRVVLA
RALLRNPRILLLDEATSALDAESEAAVQQALTRLRQGRTTLVIAHRLSTVRDADLVVAIA
DGRVAEQGTHTALMEQDGLYARLVRSQTLEL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctactctcccgccgggggtgtgcaaaccgccccccggcctgatacacccggg
tgcatggatgcacgcccgctcgatcaggtaacggatcagtcgccacccccacacgctccg
ccaaagcggagaggtaaaggggcgcggaagatcaacgtggagttggagccgaccgccctc
gctatgatggggcggctgtggcgggagcatatcgcgcatcaccgtgttcgtatgctggtg
gtgatcctgctgacggcgctgatggcgggcagcacggcgctgtatccggtggtgatccag
catgcgatcgacctgttcaatgcccgtgaccggcggattttgtaccagattccggtgctg
gtgctgatcgtcaccgccatcaagggcgcggcgatgtatgggcagaccgtctccatgcag
caactggtgctgatcgtcatcagggagttgcaggagcgtatgttcagccacctcgcccat
gccgatctggatcgggtggagcgggaggctccggcgcagcttgccgcgcgtttcaccacc
gacgccgccaccatccgggaggcgctggtccgtgccgtcaacggggtgggtgatgtggtg
acggtggtggggctggtctcctccatggtctatctggactgggtactgagcctgattgcc
gcggcgatgtatccgctggcggcgctgccgatccagaaaatcggcaagcgcatccgccgt
gcctccggcggcatgcaggagcgaatgggggaaaccgccgctctgctgaacgagagtttc
gcgcaggcccgcaccatccgcgcctaccggctggaggatttcgagatcaggcgcgccgga
gaggcttttcagcatctctacagcgcgttgttgcgtatgacgcggtcccgcgcgcgggtc
gatccggtgctggaggtgctgggcggcagcgcggtcgcggtggtgatcggcttcaccggc
tggcgcgccgcaaacggacagagcagcctgggcgatttcgccggttttatcgccgcactg
ctgatcgcctcccgcccgctgcgtgcgctcggctcgctgaacgcggcggtgcaggagggg
gtggccgggctggtccgggtgtttgccgttatcgacgagcctgccgctatcagggacgca
cccggtgcggttcctctgccgcaagggcaagggcatgtggcgttcgagaatgtgggcttc
gtctatgccgatggccgtaccgggctggacgggctgagcttcgctgctcagccgggcatg
acggtggcgctggtcgggccttcgggagccggaaaatccaccgcgctggctctgttgccg
cgcttgcgggatgcgacgtccggccgggtgctggttgatggcgcggatgtcagggaggtc
acgcttgcctctctgcgggatgccattgcctatgtggggcaggatgcattgctgttcgac
gacaccatcgccgccaatatcggcattgggcgtgagggcgcggagcgggcggagatcgag
caggccgccgaagccgctgccggaggcttcatccgcgatctgccggaggggttcgagacg
atagtcggccccggcggccagcgcctgtccggtgggcagaggcaacgtgtggtgctggcg
cgcgcactgctgcgcaatccccgcattctgctgctcgatgaagcgaccagcgcgctggat
gcggaaagcgaggccgctgtacagcaggctctgaccagattgcgtcaggggcgcaccacg
ctggtgatcgcgcaccgtctgtccaccgtgcgtgatgccgatctggtggtggccatagcc
gatggacgggtggcggagcagggcacccatacggccctgatggagcaggacgggctgtac
gcccggctggtgcgcagccagacgctggagctttaa
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