Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1812
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Entry
GbCGDNIH3_1812 CDS
T03155
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GbCGDNIH3_1812
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbc02000
]
GbCGDNIH3_1812
Transporters [BR:
gbc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GbCGDNIH3_1812
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AHJ63683
UniProt:
A0AAN0RF18
LinkDB
All DBs
Position
complement(2052434..2053672)
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AA seq
412 aa
AA seq
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MKPRFAGIIVAGVAAIMTLVTYGAGAQEKRDTSPSVLGVGFLPGVNQDFLRKNMLVDLEA
RTHLKLRFFQWNGDVDTLGHLDGPADSVLEWPEAALDAACEHGLVMPLAKVLDNSDPHHA
ATGEAEQGNTHAAPAPLSTISPDTAKPSATAGNPQRNPVPHKSTAAGIDWLPQGQGKCGL
GAWMRSMVLVWDVSKFQSVEGWSDFWDIAKYPGKRGLHRGAEGNLEIALMADGVSPGDVY
NVLSGKDGQDRAFRKLAQLRPYIVWWETDAQAVHLMASGQVLMESAPAERIFLADREAET
GAPSATGKTLRYGVQWSGNLYRIGWWAAPSGANPLMVQDFLRTWAGKEVQQAMAGQTGLG
TFSPEALAGLSPQIIRWMPTADNHWQKGLKIDAAFWAKNGAMLNERLNQLMK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcgctttgctggcattatcgtggctggtgttgccgcgatcatgacccttgtc
acttacggggcgggggcgcaggagaagcgggatacgtcgccttctgttctgggtgtaggt
tttctgccgggggtcaatcaggatttcctgcgcaaaaacatgctggtcgatctggaagca
cgtacgcatctgaagcttcgtttctttcagtggaatggcgacgttgatacactcggtcat
ctggatgggccggctgacagcgtgcttgaatggccggaagcagccctggatgctgcctgc
gagcatggtctggtaatgccgttggccaaagtgctggacaattccgaccctcatcatgct
gcgaccggagaagccgagcagggcaatactcacgccgcgcccgcaccactctcgacgata
tcccccgacactgcgaaaccatccgccacagcaggcaatccgcagcgtaatcctgtgccg
cataaatcgaccgccgcagggatagactggttgccgcaggggcagggcaaatgcgggctg
ggcgcatggatgcgcagcatggttctggtctgggatgtgtccaaattccaatccgtggaa
ggctggtcggatttctgggatatcgccaaatatccgggcaagcgcggcttgcatcgtggg
gcggaaggcaatctggaaattgccctgatggctgacggggtatcgccgggcgatgtctat
aacgtgctttccggcaaggacggtcaggatcgcgccttccgcaagctggctcagctccgt
ccctatatcgtgtggtgggagacggatgcgcaggccgtgcatctgatggcatccggacag
gtcctgatggaaagtgcgccggcggagcggatttttcttgcggaccgggaagctgaaacg
ggtgctccgtcggcaacgggaaagaccctgcgctatggtgtgcaatggagcggcaatctc
taccggattggctggtgggcggctccatccggggccaatccattgatggtgcaggacttt
ctgagaacatgggccggtaaggaggtccagcaggccatggccgggcaaaccggcctcggc
actttttcccctgaggcactggcagggttatcaccgcagatcatccgctggatgcccacg
gcggacaatcattggcagaaggggctgaaaatcgatgccgcattctgggctaaaaatggt
gcgatgctgaatgagcgcctcaaccagttgatgaaataa
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