Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1934
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Entry
GbCGDNIH3_1934 CDS
T03155
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit (fdsA)
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc00630
Glyoxylate and dicarboxylate metabolism
gbc00680
Methane metabolism
gbc01100
Metabolic pathways
gbc01120
Microbial metabolism in diverse environments
gbc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH3_1934
09102 Energy metabolism
00680 Methane metabolism
GbCGDNIH3_1934
Enzymes [BR:
gbc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GbCGDNIH3_1934
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_9
Fer4_15
Fer4_2
Fer4_4
Fer4_16
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AHJ63818
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Position
2179317..2182160
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AA seq
947 aa
AA seq
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MSLVEEIDYGTPKVVSEKAVTLTIDGRQVTVPEGTSLMRAAMDTGITVPKLCASDNLKAF
GSCRLCLVEIEGRPGTPASCTTPAMEGMVVHTQTDRLARLRKGVMELYISDHPLDCLTCS
ANGDCELQDMAGAVGLREVRYGYEGENHLHDSKDVSNPYFQYDPSKCIVCNRCVRACEEV
QGTFALTIEGRGFESRVSPGTAHDNFFSSECVSCGACVQACPTATLMEKSVIEIGQPEHS
EVTTCAYCGVGCSFKAEMRGEQIVRMVPYKDGKANHGHSCVKGRFAYGYALHKDRQLEPM
IREKITDPWRVVSWDEAIQYTAKEFRRIQDKYGRSSIGGITSSRCTNEETYLVQKLVRAV
FGNNNVDTCARVCHSPTGYGLKTTYGTSAGTQDFDSVEESDVIVVIGANPVDAHPVFGSQ
MKRRLRDGAKLIVIDPRKTDLVKSPHIKADFHLPLRPGTNVAIVSALAHVVVTEGLLDEA
FVRERTDWDSFQDWVQFVTRPENSPEAVAAICGVSAEDIRGAARLYATGGNAAIYYGLGV
TEHSQGTTTVMAIANLAMATGNLGRRGVGVNPLRGQNNVQGSCDMGSFPHEFTDYRHVSN
DAARAQFEALWGVSLDAEPGLRIPNMIDAAVDGTYKGIYIQGEDIVQSDPDTTHMIAGLK
NMECVVVQDLFLNETADYAHVFLPGCSFLEKDGTFTNAERRINRVRKVMSPKNGYGDWEI
TQMLAKAMGYPMHYNHPSEIMDEIAATTPNFALVSYAKLDEVGSVQWPCNDEHPDGMPIM
HIGQFSRGKGYFVVTEYIATDEKTGPLFPLLLTTGRILSQYNVGAQTRRTHNSMWHEEDR
LDIHPKDAEDRGVRDGDWVKLESRSGATSLRARITEKVPPGVVYTTFHHPASQANVVTTD
NSDWATNCPEYKVTAVQVQRSNGPTEWQREYGDHSTQARRIIPAAAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgtggaagaaatcgactatggcacgccaaaagttgtcagtgagaaagccgtc
accctgaccattgacggccgccaggtgacggtgccggaaggcacctccctgatgcgcgcc
gccatggataccggcattacggtgcccaagctctgcgcctccgacaatctgaaggcgttc
ggttcctgccgcctctgtctggtggaaatcgagggccgtccgggcaccccggcttcctgc
accacaccggccatggaaggcatggtggtgcatacccagaccgaccgtctggcgcgcctg
cgcaagggcgtgatggagctgtatatctccgaccatccgctggactgcctcacctgctcc
gccaatggcgattgcgagcttcaggatatggccggtgccgtcggcttgcgggaagtccgc
tatggctatgagggtgaaaaccacctgcatgacagcaaagatgtcagcaacccgtatttc
cagtacgatccgtccaagtgcatcgtctgtaatcgctgcgtccgtgcctgtgaggaagtg
cagggtaccttcgccctgaccattgagggccgtggcttcgaaagccgcgtatcccccggt
accgcgcatgataatttcttttcttcggaatgcgtttcctgcggcgcctgtgtgcaggcc
tgcccaaccgcaaccctgatggaaaaatccgtcatcgaaatcggccagccggaacattcc
gaagtcactacctgcgcctattgcggtgtcgggtgcagcttcaaggccgaaatgcgcggc
gaacagatcgtgcgcatggttccctataaggacggcaaggccaatcatggccatagctgc
gtcaagggccgcttcgcctacggttatgcattgcacaaggatcgtcagcttgagccgatg
atccgtgaaaaaatcaccgatccgtggcgtgtggtgagctgggatgaagccatccagtac
accgcgaaagaattccgccggattcaggacaaatacggccgctcctctatcggcggtatt
acctcctcccgctgcaccaatgaagaaacctatctggtgcagaagctggtgcgtgccgtg
ttcggcaataacaatgtcgatacctgcgcccgcgtctgccactctcctaccggctatggg
ttgaagacgacctacggcacctccgcaggcacgcaggatttcgacagcgtcgaggaaagc
gatgtcattgtggtgatcggtgccaatccggtcgatgcccatcccgtgttcggcagccag
atgaagcgtcgtctgcgtgatggcgcaaagctgatcgtgatcgatccgcgcaagaccgat
ctggtgaaatccccgcatatcaaggccgatttccatctgcccctgcgacccggcaccaat
gtcgccatcgtttccgcactggcccatgttgttgtgacagaagggctgctggacgaagct
ttcgtacgtgaacgcacggattgggactcctttcaggattgggtgcagttcgtgacccgc
ccggaaaacagcccggaagcggtcgccgcaatctgcggtgtcagcgccgaggatatccgt
ggcgctgcccgtctctatgcaaccggcgggaatgccgcgatctattacggtctgggtgtg
accgagcacagccagggcacgacgacagtgatggccattgccaacctcgccatggcgacc
ggcaatctggggcgtcgtggtgtgggtgtgaacccgctgcgtgggcagaacaatgttcag
ggttcgtgcgacatggggtcttttccccatgaattcaccgattatcgtcacgtttccaac
gatgccgcccgcgcccagttcgaagcgctgtggggtgtgtcgctggatgccgagccgggt
ttacgcattccgaacatgatcgatgccgccgtcgatgggacttacaaaggcatctacatt
cagggtgaggacattgttcagtccgaccctgataccacccatatgattgccggtctgaag
aacatggaatgcgtcgtcgttcaggacctgttcctgaatgaaaccgccgactatgcccat
gtgtttctgccgggctgctcattccttgagaaggatggaaccttcaccaatgccgagcgc
cgcatcaatcgcgtgcgcaaggtgatgtcgccgaaaaatggttatggtgactgggaaatt
acccagatgctggccaaggccatgggttatcccatgcactacaaccacccgtccgagatc
atggacgagattgccgctactactccgaacttcgcccttgtttcttacgcgaaactcgat
gaggtcggctctgtgcagtggccttgcaatgatgagcatccggatggcatgccgatcatg
catatcggccagttcagccgcggcaagggttatttcgtcgtcaccgaatatatcgcgacc
gatgaaaagaccggcccgctcttcccgcttctgctcaccaccggccgcattctcagccag
tataacgtgggcgcgcagacacgccgcacccataactccatgtggcatgaggaagaccgg
ctggatatccatccgaaagacgccgaggatcgcggcgttcgtgatggggactgggtgaaa
ctggaaagccgctccggcgcgacatcgctgcgggcacgcatcaccgaaaaggtcccgccg
ggcgtggtctacaccacgttccatcacccggcgagccaggccaatgttgtgaccaccgat
aactccgactgggccaccaactgcccggaatacaaggttacagccgtgcaggtacagcgc
agcaatggccccaccgagtggcagcgtgaatacggcgatcactccacgcaggcccgccgg
attatcccggcggctgcggaataa
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