Granulibacter bethesdensis NIH3.1: GbCGDNIH3_2298
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Entry
GbCGDNIH3_2298 CDS
T03155
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GbCGDNIH3_2298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbc03400
]
GbCGDNIH3_2298
Enzymes [BR:
gbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GbCGDNIH3_2298
DNA repair and recombination proteins [BR:
gbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GbCGDNIH3_2298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AHJ64202
UniProt:
A0AAN0RFN6
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All DBs
Position
2563267..2564898
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AA seq
543 aa
AA seq
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MDDSSNPHTTPETSAGVSGSRGLDNIPEYSVSDLSGTIKRTLEGAFGRVRVRGELTEVKR
YPSGHIYLSLKDEGGKIAGVVWKFAVPRLGMLPENGVEVVATGKISSYADRSSYQLIIDR
MEYAGAGALLARIEMLRQRLAEEGLFDAARKRALPRLPRVVGVVSSEKGAVLQDIRTTIA
RRFPRTVLLWPVPVQGEGAAAKIAAAIDGFGRLPPDGPVPRPDVLIVARGGGSLEDLMAF
NEEIVIRAAAACPIPVISAVGHETDTTLIDYASDRRAPTPTAAAELAVPMRAELTADLAH
KTARLGGALSRMTQGARLELAQAERLLPDLPTLLGHARQRLDDRVLRLGMALPGLLSARR
AALRNAVLRLPRPAHIIAETRQHLRGTKNRLRVAMPMLLAHKSSALRLHALRLGASLRHS
LHLHLRDARPLFARMRAAPLPGRLREAQARLDGLGARLESVSYQAVLARGYALVLDHDGH
AVTHAARIASGQTLTLRFSDGEKTVQATDNPAESTPPAGNDTASVKRTARKKSGPQKQGD
LLL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcatccaatccacatacgaccccagaaacctctgccggcgtatccggcagc
cgggggctggacaatattcccgaatattcggtctccgacctgtccggcaccatcaaacgc
acgctggaaggcgccttcggacgtgtgcgcgtgcgcggcgagctgacggaggtcaagcgc
tacccatcaggccatatctatctgtcgctcaaggatgagggcggcaaaattgctggtgtc
gtatggaaattcgccgttccccgtctcggcatgctgccggaaaacggggtggaggtggtc
gcgaccggcaaaatctcctcctatgcggatcgttcctcctaccagctcatcatcgaccgg
atggagtatgcgggggccggagcgctgctggcgcgaatcgagatgctgcgtcagcgtctg
gcggaggaagggctgttcgatgccgcccgcaagcgcgccctgccgcggctgccgcgagtc
gtgggcgtggtcagctctgaaaaaggggccgttcttcaggacatccgcacgaccatcgcc
cggcgctttccccgcaccgtcctgctctggccggtgccggtgcagggcgaaggggccgcc
gcgaaaatcgctgccgccatcgacggattcggcaggctgccgccggatgggccggtgccc
cgtcctgatgtgctgatcgtggcgcggggtggcggcagtctggaagatctgatggcgttc
aatgaggaaatcgtcattcgcgccgccgccgcctgcccgatccccgtgatttccgccgtc
ggccatgaaaccgatacgaccctgatcgactacgcctccgaccggcgtgcccccaccccg
actgccgcggccgagctggcggtgccgatgcgggccgaactcacggctgatctggctcac
aagaccgcgcggctcggcggagcgctcagccggatgacgcagggtgcgcggctggaactg
gctcaggccgagcgtcttctgcctgatctgcccaccctgcttggtcatgcgcgacagagg
ctggatgaccgcgtgctgcgactgggcatggcgctgcccggtctgctgtcagcaagacgg
gccgcgttaaggaatgcggtgctacggctgcctcgccccgcccacatcattgctgaaacc
cgccagcatctgcgaggaaccaaaaaccgcctgcgtgtggcgatgcccatgctgctggcc
cataaaagcagcgccctgcggctgcatgcgctgcgactgggggccagtctgcggcacagc
cttcatctgcatctgcgtgacgcccgccccctgttcgcccgcatgagggcagcccccctg
cccggacggctgcgggaggcacaggcgcggctggacgggcttggcgcaaggctggaaagc
gtttcctatcaggcggtgctggcacgcggctatgcgctggtgctggatcatgatggccat
gccgtcactcatgcagcccggatcgccagcgggcagacactgaccttgcgcttcagcgat
ggcgagaaaaccgtgcaggcaacagacaatccggcagaaagcacgccaccggctggaaac
gacactgcctctgtcaaacgcactgccagaaaaaagtcaggcccccagaaacagggggat
ctgcttctgtaa
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